Gene detail information of Glyur000665s00020430 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41120.1 | 2.00E-66 | |
| NR | XP_004493293.1 | 9.57E-116 | PREDICTED: uncharacterized protein LOC101492956 [Cicer arietinum] |
| COG | YP_721319.1 | 9.00E-19 | hypothetical protein Tery_1566 [Trichodesmium erythraeum IMS101] |
| trEMBL | tr|Q2HUI2|Q2HUI2_MEDTR | 4.00E-116 | DUF309 domain protein {ECO:0000313|EMBL:AES81063.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00665 | 114674 | 116298 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000665s00020430.1 | PF03745.9 | DUF309 | 27 | 85 | 1.50E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.633 |
| SRR1783600 | control | 0.696 |
| SRR1783602 | moderate drought stress | 1.163 |
| SRR1811619 | moderate drought stress | 1.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.671 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.534 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.689 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.894 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.705 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.032 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 55.277 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 54.453 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.289 |
| SRR2868004 | Drought Stress (root) | 6.284 |
| SRR2967015 | Control (root) | 5.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 34.203 |
| SRR9715740 | Leaf | 77.157 |
| SRR9715741 | Leaf | 44.327 |
| SRR9715739 | Root | 0.032 |
| SRR9715742 | Root | 0.458 |
| SRR9715743 | Root | 0.793 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.319 |
| SRR8749028 | MeJA induced 9h | 1.726 |
| SRR8749029 | MeJA induced 9h | 0.949 |
| SRR8749030 | Uninduced | 1.753 |
| SRR8749031 | Uninduced | 0.404 |
| SRR8749032 | Uninduced | 0.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.728 |
| SRR8400027 | Control - Root | 2.311 |