Gene detail information of Glyur000664s00026053 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22930.1 | 3.00E-24 | Protein of unknown function (DUF1635) |
| NR | KHN21073.1 | 6.27E-130 | hypothetical protein glysoja_006552 [Glycine soja] |
| trEMBL | tr|I1LR87|I1LR87_SOYBN | 2.00E-129 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G08590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00664 | 37876 | 39901 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000664s00026053.1 | PF07795.6 | DUF1635 | 18 | 260 | 2.50E-71 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 94.388 |
| SRR1783600 | control | 94.992 |
| SRR1783602 | moderate drought stress | 19.685 |
| SRR1811619 | moderate drought stress | 19.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 52.580 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 52.671 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.635 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.664 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.163 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.392 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.787 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.715 |
| SRR2868004 | Drought Stress (root) | 14.586 |
| SRR2967015 | Control (root) | 19.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.923 |
| SRR9715740 | Leaf | 2.475 |
| SRR9715741 | Leaf | 6.216 |
| SRR9715739 | Root | 28.985 |
| SRR9715742 | Root | 22.858 |
| SRR9715743 | Root | 22.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.098 |
| SRR8749028 | MeJA induced 9h | 12.188 |
| SRR8749029 | MeJA induced 9h | 3.142 |
| SRR8749030 | Uninduced | 3.506 |
| SRR8749031 | Uninduced | 1.056 |
| SRR8749032 | Uninduced | 0.711 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 49.764 |
| SRR8400027 | Control - Root | 71.929 |