Gene detail information of Glyur000663s00030877 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78430.1 | 1.00E-58 | ROP interactive partner 2 |
| NR | XP_007149321.1 | 0 | hypothetical protein PHAVU_005G060700g [Phaseolus vulgaris] |
| Swissprot | tr|Q9M9F9|ICR4_ARATH | 4.00E-90 | Interactor of constitutive active ROPs 4 |
| trEMBL | tr|V7BW93|V7BW93_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW21315.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00663 | 119073 | 120571 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.232 |
| SRR1783600 | control | 22.558 |
| SRR1783602 | moderate drought stress | 15.631 |
| SRR1811619 | moderate drought stress | 15.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.524 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.557 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.270 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.532 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.298 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 78.679 |
| SRR2868004 | Drought Stress (root) | 52.208 |
| SRR2967015 | Control (root) | 62.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.989 |
| SRR9715740 | Leaf | 2.593 |
| SRR9715741 | Leaf | 6.722 |
| SRR9715739 | Root | 7.122 |
| SRR9715742 | Root | 25.437 |
| SRR9715743 | Root | 25.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.214 |
| SRR8749028 | MeJA induced 9h | 3.146 |
| SRR8749029 | MeJA induced 9h | 4.248 |
| SRR8749030 | Uninduced | 0.377 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 115.334 |
| SRR8400027 | Control - Root | 155.950 |