Gene detail information of Glyur000663s00030876 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17130.1 | 4.00E-106 | Family of unknown function (DUF572) |
| NR | XP_006594687.1 | 0 | PREDICTED: coiled-coil domain-containing protein 94 homolog [Glycine max] |
| trEMBL | tr|C6TI31|C6TI31_SOYBN | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU21483.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00663 | 102378 | 118436 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000663s00030876.1 | PF04502.8 | DUF572 | 1 | 324 | 4.00E-106 |
| Glyur000663s00030876.2 | PF04502.8 | DUF572 | 1 | 324 | 4.00E-106 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.483 |
| SRR1783600 | control | 4.406 |
| SRR1783602 | moderate drought stress | 8.442 |
| SRR1811619 | moderate drought stress | 8.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.820 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.878 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.761 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.843 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.264 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.580 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.341 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.728 |
| SRR2868004 | Drought Stress (root) | 13.623 |
| SRR2967015 | Control (root) | 12.543 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.733 |
| SRR9715740 | Leaf | 3.428 |
| SRR9715741 | Leaf | 3.222 |
| SRR9715739 | Root | 0.049 |
| SRR9715742 | Root | 0.496 |
| SRR9715743 | Root | 0.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.180 |
| SRR8749028 | MeJA induced 9h | 15.388 |
| SRR8749029 | MeJA induced 9h | 10.798 |
| SRR8749030 | Uninduced | 36.156 |
| SRR8749031 | Uninduced | 29.169 |
| SRR8749032 | Uninduced | 21.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.204 |
| SRR8400027 | Control - Root | 3.855 |