Gene detail

Gene detail information of Glyur000663s00030875

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G78440.1	2.00E-103	Arabidopsis thaliana gibberellin 2-oxidase 1
NR	AAF08609.1	0	gibberellin 2-beta-hydroxylase [Pisum sativum]
COG	YP_004572412.1	5.00E-27	oxidoreductase [Microlunatus phosphovorus NM-1]
Swissprot	tr\|Q9SQ80\|G2OX1_PEA	0	Gibberellin 2-beta-dioxygenase 1
trEMBL	tr\|A0A072V8U1\|A0A072V8U1_MEDTR	0	Plant gibberellin 2-oxidase {ECO:0000313\|EMBL:KEH38429.1}

Sequence

Transcript Sequence

>Glyur000663s00030875.1
ATGATGCGGTTGTCCAAACCAACATCAGAACAATACTCCAGTGTCAGGAACATCATGCCAACAACATTCTCCTTAGAGATTCCCATCGTGGACCTCTCAAAACCAGAGGCAAAGAGCCTCATAGTGAAGGCCTGTGAGGAGTTTGGGTTCTTCAAAGTCATCAACCATGGTGTTCCCGTGGAAGCTATATCCCAATTGGAATCTGAGGCCTTCAAGTTCTTCTCTCAGCCAATCACTGAGAAGGAGAAAGTTGGAATGTACCCAAAAAAAATCACTGAGAAGGAGAAAGTTGGAACTGCCAACCCTCTTGGGTATGGTAACAAGCGTATTGGAACCAATGGTGATGTGGGTTGGGTCGAATACCTTCTTCTCACTGCCAATGAAGATCACAATTTCTCTTACACGTGTGCTACGAGGAGGATGGCATGTGAGATTCTTGAGTTGATGGCAGAAGGGTTGAAGATTCAGCCAAAGAATGTGTTGAGCAAGCTTGTGATGGACAAACAGAGTGACTCTCTTTTCAGGGTCAATCACTACCCTGCTTGCCCTGAAATGAATCTGAATGGTGAGAATTTGATTGGGTTTGGAGAGCACACTGACCCTCAAATCATTTCTCTGCTGAGGTCCAATAACACTTCTGGCCTTCAGATTTCACTCAGGGATGGGAGCTGGATTTCAGTCCCACCTGATCACAGCTCCTTCTTCATCAATGTTGGTGATTCTCTTCAGGTGATGACTAATGGGCGGTTCCGGAGTGTGAGACACAGGGTATTGGCAAATGGGTTGGAATCAAGNCTCTCAATGATTTACTTTGGTGGTCCACCTCTGAGTGAGAAAATAGCACCATTGCCTTCTCTCATGAAAGGAAAAGAGAGCTTGTACAAAGAGTTCACTTGGTTTGAGTACAAGAATTCATCTTATGCTACTAGATTGGCTGACAATAGGCTTGGACTCTATGAAAGAATTGTTGCCTCCTAAAGCAATAAGAGGATTTTATGGGGTGCACTTGTCAATACAAAATGGGGGAGGGGGATACAATATATACACTATAAGTGTTTTTTCTTTTCTTTTTCTTTTCTTTTTTTCTAGTTACTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00663	90765	92961	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K04125	E1.14.11.13	EC:1.14.11.13	Diterpenoid biosynthesis	map00904

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0016491 oxidoreductase activity

GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000663s00030875.1	PF14226.1	DIOX_N	27	127	1.60E-16
Glyur000663s00030875.1	PF03171.15	2OG-FeII_Oxy	171	272	1.40E-23

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	53.440
SRR1783600	control	50.568
SRR1783602	moderate drought stress	45.651
SRR1811619	moderate drought stress	43.933

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	18.963
DRR006520	Root Summer glycyrrhizin high producing strain	19.403
DRR006521	Root Winter glycyrrhizin high producing strain	5.545
DRR006522	Root Winter glycyrrhizin high producing strain	5.475
DRR006523	Root Summer glycyrrhizin low producing strain	6.336
DRR006524	Root Summer glycyrrhizin low producing strain	6.312
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.351
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.133

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	15.005
SRR2868004	Drought Stress (root)	25.640
SRR2967015	Control (root)	44.308

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	32.209
SRR9715740	Leaf	12.214
SRR9715741	Leaf	26.160
SRR9715739	Root	150.290
SRR9715742	Root	116.453
SRR9715743	Root	122.540

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.959
SRR8749028	MeJA induced 9h	2.475
SRR8749029	MeJA induced 9h	2.397
SRR8749030	Uninduced	14.663
SRR8749031	Uninduced	10.470
SRR8749032	Uninduced	61.037

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	29.610
SRR8400027	Control - Root	16.840