Gene detail information of Glyur000663s00030874 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17100.1 | 3.00E-64 | SOUL heme-binding family protein |
| NR | XP_003546762.1 | 1.06E-121 | PREDICTED: heme-binding protein 2-like [Glycine max] |
| trEMBL | tr|I1MJ14|I1MJ14_SOYBN | 4.00E-122 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G39740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00663 | 54410 | 55888 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000663s00030874.1 | PF04832.7 | SOUL | 37 | 220 | 5.20E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.005 |
| SRR1783600 | control | 3.992 |
| SRR1783602 | moderate drought stress | 3.063 |
| SRR1811619 | moderate drought stress | 3.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.485 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.489 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.126 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.123 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.875 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.875 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 27.311 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 26.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.837 |
| SRR2868004 | Drought Stress (root) | 4.546 |
| SRR2967015 | Control (root) | 3.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.191 |
| SRR9715740 | Leaf | 26.698 |
| SRR9715741 | Leaf | 11.704 |
| SRR9715739 | Root | 1.518 |
| SRR9715742 | Root | 2.081 |
| SRR9715743 | Root | 1.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.437 |
| SRR8749028 | MeJA induced 9h | 17.879 |
| SRR8749029 | MeJA induced 9h | 10.634 |
| SRR8749030 | Uninduced | 3.990 |
| SRR8749031 | Uninduced | 0.598 |
| SRR8749032 | Uninduced | 3.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.174 |
| SRR8400027 | Control - Root | 4.597 |