Gene detail

Gene detail information of Glyur000662s00023489

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G47900.2	Plant protein of unknown function (DUF869)
NR	XP_006577974.1	PREDICTED: filament-like plant protein 4-like isoform X1 [Glycine max]
Swissprot	tr\|Q9C698\|FPP6_ARATH	Filament-like plant protein 6
trEMBL	tr\|K7KHS2\|K7KHS2_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA04G02770.2}

Sequence

Transcript Sequence

>Glyur000662s00023489.1
CTTTTACTTTGCTTTCCCCTCAAGTTTGAGAAGTGAGTGGAGTGGAGTTGAGAGAAACGGAATATATTCCTGGTAATGGTGGTATACGGTTATAGCATGTCCCTGCACATTAGAGATGATAGGGAAAGTGCAGTGAATTAGATCTCGGAGATCGCCGATACATACATAAATAAAACTTGATATCATTGGCTTGTGTATGCGGTGTACCCGTCACTGAAGCAGCAGTACNACCCGGCTTCAATGCATTTTTCACCAATATAGTGGTCTTTAGAATTTCTGATGGACCGACGGTGGCCCTGGAAGAAAAAATCATCTGACAAGGTCGTGATTGAGAAAGCAGCTGCTGCATTAGACTCCTCCGATGCTTCCAATCAGGGCAATCAGGATAACCACAAAAAACCGAGCTATGTNCAAATCTCTGTGGAATCCTATTCACATATGTCTGGTTTGGAGGATCAAGTGAAAACATATGAGGAAAAAGTTCAGACACTTGAAAATGAGATCAAGGAAATGAATGAAAAGCTGTCTGCAGCTAACTCTGAGATTAATACCAAGGAAGGCATGGTAAAACAACATGCTAAAGTAGCTGAAGAAGCTGTCTCAGGCTGGGAAAAGGCTGAAGCTGAAGCTTTGGCATTGAAGAACCATCTGGAATCTGTCACTCTTTTAAAACTCACTGCTGAGGACAGTGCGTCACATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGGAACCTTAAGGAAGAACATGAACATAAAATACAGGAAGTTGCTCTGTCAAAAACCAAGCAATTAGACAAGATTAAGGGGGAGCTTGAGGCTAAGATAGCTAACTTTGAACAGGAACTCCTTAGGTCTGCTGCTGAAAATGGGGCTCTGTCAAGGTCCTTGCAGGAGCGCTCTAACATGCTAATTAAATTAAGNGAAGAAAAAGCTCATGCTGAGGCTGAAATTGAGCTTCTTAAGAGCAACATAGAATCATGTGAAAGAGAAACTAATTCACTTAAATATGAGCTTCATGTTGTCTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAAAACATGAGTATGAGGTCTGCCGAAGCTGCTAACAAGCAGCACATGGAGGGTGTAAAAAAAATTGCTAAGTTAGAAGCTGAGTGCCAAAGATTACGTGGTCTAGTGCGGAAAAAATTACCTGGTCCTGCTGCACTTGCACAGATGAAGCTAGAAGTTGAAAATCTTGGCCGAGANTATGGAGAAAGTCGATTGAGGAAGTCTCCTGTGAAGCCTACTACCCCAAATTCGTCCCCATTACCTGAGTTCTCCCTGGATAATGTACAGAAATTCCAGAAGGAGAATGAATTTCTTACAGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCGTTGGCTAAACGGAACAGTGAATTGCAGGCCTCAAGGAGTATGTGTGCTAAGACACTGAGCAAACTTCAAAGTTTGGAAGCACAACTTCAGACAAGTAACCAGCNGAAAGGATCTCCAAAATCCATCATGCAGATAGCCCATGAAAGCATTTATAGTCAAAATGCAAGCAGTGCAGCAAGCTTGGTCTCCATGTCTGAAGATGGAAATGATGATGCAGGAAGTTGTGCCGAGTCTTGTTCTACAGCAGTAGTATCTGGGCTATCCCAAGTTTCTAAAGAAAATAGCACCAAGGAATCAAGCAAATCCNAAGCCATTCAGAAGCTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAGTTAGCCCGTTTGTCAAATGATTCCAACGCAGATGCCACTGTTTCAGTATCTTCAGACAATAAGACGACCCTTGTAACCAATGATGTATCAGAAGTCAGTACTGACAAAGATGGTCCATCTGAAAATAGCGGCGATTCAAATCCATTGCCAAATCAAGTGTCTTCTGGTGCTTTGATGTCAGCACCTAACTCCCAATCTGATGTTGGTGGCTTATTAACAGAACTTAGATCAAGAATATTACTGGTTTTTGAGTCCATTGCTAAGGATGCTGATATAGGGAAGATTGTGGAGGATATTAAACATGTGCTAGAAGATTCACATGACACTGTCATCCACCACTCTGTAGGTTTCGTTTCCCAGGATGCGCAGCCTTCTGATGCTACATGTGACAGGCAGGATAATCCTGAAGATGCTGGCTTAAACATTGAAAAGGAAACCATTTCATCCCAGCAACCCAAAGAATACATGCAGATAACTTCGGATTTGGAAGCTGCAATTTCTCAGATTCATGACTTTGTTTTGTTTCTAGGCAAAGAAGCAGTGGCATTTCATGACGTATCTTCTGATGGAAATGAAATGAGGCAAAAGATTGAAGAGTTCTCTGTCACCTTTAATAAAGTTTTATGCAACAATGCAAGTCTGCTACAGTTTGTTCTTGACCTGTCTTACGTTTTGGCTAAAGCAAGTGAACTCAGATTTAATGTCCTTGGCTACAAGAGTACAGAAGCTGAAACTAACAGTCTTGATTGCATAGATAAGATTGCTTTGCCTGAAAATAAGTTAGTTCAACACAATTCATCTGGAGAAAGATATCAAGATGGTTGTTCCCATGTTCTTAATCCCTGTTCTAATCCTGAGGTTCCTGATGATGGAAATTTGGTCTCAGGCTATAAAGCGAATGCAGCATCACCGAAACTGTCAATGGAGGAATTTGAAGAATTGAAACTAGAGAAAGAGAAAGTNGTGATTGATCTGTCAAAATGTACTGAGAATCTTGAAATGACCAAGTCTCAATTGCTAGAAACTGAGCAACTTCTAGCAGAAGTTAAATCACAATTGGCTTCCTCTCAAAGATCAAACAGCTTGGCTGAGACACAGCTAAAGTGTATGGCAGAGTCATACAAGTCACTNGAAACACGTGCCCAGGAGTTTGAAACCGAGCTGAACCGTCTGCAGATTAAGACAGAAACTCTGGAGAACGAGCTTCAAGATGAAAAGAGGGCTCATGAAGCTGCTTTGACGAAGAGCAAGGAGCTAGAAGAGCAGTTACTAAGGATTGAGAGCTCAGCAGCTGAGAATGACCTCAAGACTGCGCAGGAGAGAGATTTGACGGCTGCTGCTGAAAAGCTAGCTGAGTGTCAGGAAACCATATTTCTTCTGGGAAAGCAGTTAAACTCTCTACGCCCTCAACCTGAACCAATTGAATCTCCAAACAGTAAGATGAATCCAAAGGTTGAAGGCTTCACAGTGGATGAACCTACTACTAGTAGCCCAAATTTCCAAGAAGTTGGTCAGTTGGAGATGGACAGTGCTACTCCTGCTTTTGTGCAAAGACTGAGTTCGGATTCCCCCTTGCATTTTTCCAACAGTTTGTTTAGCCCATCAGATAACGAGTCAACGGTGCAGCATCCAAAATCAAAACCAAAACACAGACCTACCAAGTCAGCATCTTCTTCNGCTTCTTCCGCCACTACGCCGGAGAAACATGCACGGGGGTTTAGTAGATTCTTTTCATCAAAAGGGAAACCCTCTCATTGAGCTTGCAGCTCGCAGGCTCTATGATAATTCATAATGAGGAAGCCACATTTGGAAAACACCAAGGTCCAGACATCTTATGATCTTCATGTTTGACATAATAGAATTGAGTTTTTGGGGAGGTTTGTGTAGTTAAGGAGGGAATGCCACGAGTGTCAGGTGATTCTTGTATGTAATGGTTGTACATGGTAACCATATGTTGTTTTCTTCTTTTCCTTCTCATTGTTTTTACCCCCTTTGTTTTGTAATGATATTAGCAAACTACAG

Protein Sequence

>Glyur000662s00023489.1
MDRRWPWKKKSSDKVVIEKAAAALDSSDASNQGNQDNHKKPSYVQISVESYSHMSGLEDQVKTYEEKVQTLENEIKEMNEKLSAANSEINTKEGMVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLLKLTAEDSASHLDGALKECMRQIRNLKEEHEHKIQEVALSKTKQLDKIKGELEAKIANFEQELLRSAAENGALSRSLQERSNMLIKLXEEKAHAEAEIELLKSNIESCERETNSLKYELHVVSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRXYGESRLRKSPVKPTTPNSSPLPEFSLDNVQKFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQLQTSNQXKGSPKSIMQIAHESIYSQNASSAASLVSMSEDGNDDAGSCAESCSTAVVSGLSQVSKENSTKESSKSXAIQKLELMDDFLEVEKLARLSNDSNADATVSVSSDNKTTLVTNDVSEVSTDKDGPSENSGDSNPLPNQVSSGALMSAPNSQSDVGGLLTELRSRILLVFESIAKDADIGKIVEDIKHVLEDSHDTVIHHSVGFVSQDAQPSDATCDRQDNPEDAGLNIEKETISSQQPKEYMQITSDLEAAISQIHDFVLFLGKEAVAFHDVSSDGNEMRQKIEEFSVTFNKVLCNNASLLQFVLDLSYVLAKASELRFNVLGYKSTEAETNSLDCIDKIALPENKLVQHNSSGERYQDGCSHVLNPCSNPEVPDDGNLVSGYKANAASPKLSMEEFEELKLEKEKVVIDLSKCTENLEMTKSQLLETEQLLAEVKSQLASSQRSNSLAETQLKCMAESYKSLETRAQEFETELNRLQIKTETLENELQDEKRAHEAALTKSKELEEQLLRIESSAAENDLKTAQERDLTAAAEKLAECQETIFLLGKQLNSLRPQPEPIESPNSKMNPKVEGFTVDEPTTSSPNFQEVGQLEMDSATPAFVQRLSSDSPLHFSNSLFSPSDNESTVQHPKSKPKHRPTKSASSSASSATTPEKHARGFSRFFSSKGKPSH

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00662	66210	71964	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000662s00023489.1	PF05911.6	DUF869	92	969	1.50E-253
Glyur000662s00023489.2	PF05911.6	DUF869	92	969	1.50E-253

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	23.008
SRR1783600	control	22.132
SRR1783602	moderate drought stress	16.383
SRR1811619	moderate drought stress	15.928

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	15.473
DRR006520	Root Summer glycyrrhizin high producing strain	14.002
DRR006521	Root Winter glycyrrhizin high producing strain	0.473
DRR006522	Root Winter glycyrrhizin high producing strain	0.461
DRR006523	Root Summer glycyrrhizin low producing strain	13.779
DRR006524	Root Summer glycyrrhizin low producing strain	13.710
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.346
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.011

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	28.907
SRR2868004	Drought Stress (root)	19.035
SRR2967015	Control (root)	23.432

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.408
SRR9715740	Leaf	10.007
SRR9715741	Leaf	9.837
SRR9715739	Root	1.764
SRR9715742	Root	11.290
SRR9715743	Root	9.998

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	27.418
SRR8749028	MeJA induced 9h	12.423
SRR8749029	MeJA induced 9h	15.954
SRR8749030	Uninduced	11.465
SRR8749031	Uninduced	0.848
SRR8749032	Uninduced	1.344

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	27.823
SRR8400027	Control - Root	27.530