Gene detail information of Glyur000662s00023487 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G27230.1 | 1.00E-150 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_003523577.1 | 0 | PREDICTED: uncharacterized protein LOC100798510 [Glycine max] |
| trEMBL | tr|I1JT45|I1JT45_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G02800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00662 | 49854 | 51047 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000662s00023487.1 | PF03141.11 | Methyltransf_29 | 236 | 349 | 8.00E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.397 |
| SRR1783600 | control | 2.683 |
| SRR1783602 | moderate drought stress | 3.656 |
| SRR1811619 | moderate drought stress | 3.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.577 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.460 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.369 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.546 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.875 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.558 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.731 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.908 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.503 |
| SRR2868004 | Drought Stress (root) | 4.292 |
| SRR2967015 | Control (root) | 4.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.195 |
| SRR9715740 | Leaf | 0.121 |
| SRR9715741 | Leaf | 0.055 |
| SRR9715739 | Root | 4.519 |
| SRR9715742 | Root | 1.443 |
| SRR9715743 | Root | 2.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.093 |
| SRR8749028 | MeJA induced 9h | 1.301 |
| SRR8749029 | MeJA induced 9h | 0.658 |
| SRR8749030 | Uninduced | 0.234 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.376 |
| SRR8400027 | Control - Root | 4.504 |