Gene detail information of Glyur000662s00023484 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G39600.1 | 1.00E-47 | |
| NR | AFK35771.1 | 1.92E-71 | unknown [Medicago truncatula] |
| trEMBL | tr|I3S679|I3S679_MEDTR | 7.00E-72 | Uncharacterized protein {ECO:0000313|EMBL:AFK35771.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00662 | 36045 | 41003 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 36.546 |
| SRR1783600 | control | 36.053 |
| SRR1783602 | moderate drought stress | 27.047 |
| SRR1811619 | moderate drought stress | 27.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.273 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.762 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.105 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.959 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.106 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.301 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.327 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.365 |
| SRR2868004 | Drought Stress (root) | 25.038 |
| SRR2967015 | Control (root) | 25.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.668 |
| SRR9715740 | Leaf | 17.216 |
| SRR9715741 | Leaf | 12.334 |
| SRR9715739 | Root | 20.379 |
| SRR9715742 | Root | 19.576 |
| SRR9715743 | Root | 20.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.210 |
| SRR8749028 | MeJA induced 9h | 25.972 |
| SRR8749029 | MeJA induced 9h | 39.360 |
| SRR8749030 | Uninduced | 10.505 |
| SRR8749031 | Uninduced | 4.428 |
| SRR8749032 | Uninduced | 9.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.562 |
| SRR8400027 | Control - Root | 30.960 |