Gene detail information of Glyur000662s00023478.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38900.3 | 5.00E-58 | Basic-leucine zipper (bZIP) transcription factor family protein |
| NR | XP_003523619.1 | 0 | PREDICTED: uncharacterized protein LOC100779731 [Glycine max] |
| Swissprot | tr|Q69IL4|RF2A_ORYSJ | 8.00E-40 | Transcription factor RF2a |
| trEMBL | tr|I1JT50|I1JT50_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G02850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00662 | 2142 | 7803 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bZIP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000662s00023478.1 | PF07716.10 | bZIP_2 | 359 | 411 | 2.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.340 |
| SRR1783600 | control | 14.586 |
| SRR1783602 | moderate drought stress | 21.535 |
| SRR1811619 | moderate drought stress | 21.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.238 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.855 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.281 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.021 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.542 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.500 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.105 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.740 |
| SRR2868004 | Drought Stress (root) | 21.967 |
| SRR2967015 | Control (root) | 20.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.844 |
| SRR9715740 | Leaf | 9.204 |
| SRR9715741 | Leaf | 13.856 |
| SRR9715739 | Root | 0.980 |
| SRR9715742 | Root | 3.964 |
| SRR9715743 | Root | 3.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.847 |
| SRR8749028 | MeJA induced 9h | 19.766 |
| SRR8749029 | MeJA induced 9h | 8.643 |
| SRR8749030 | Uninduced | 11.000 |
| SRR8749031 | Uninduced | 11.251 |
| SRR8749032 | Uninduced | 7.580 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.105 |
| SRR8400027 | Control - Root | 23.841 |