Gene detail

Gene detail information of Glyur000661s00022632

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G22970.1	1.00E-78	Protein of unknown function (DUF506)
NR	XP_004495406.1	0	PREDICTED: uncharacterized protein LOC101515752 isoform X2 [Cicer arietinum]
trEMBL	tr\|I1NIB2\|I1NIB2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G35390.1}

Sequence

Transcript Sequence

>Glyur000661s00022632.1
AAAACGCTAAAAAAGAAGAAAAAGAAAATACGGAAATTAAAGACCAAAATAACAGAAGCCTCTGCAACCCATTTCTCTTCCTCAAACAGGGACCCACCGCCGGCGACTGTGAACTGGCCGGTGAAATGAACATCCCGGCGAACTTGTCTTCCCTGTCCATGAACAATGCACGTCTCGCCGATCATCGCCGCCATGTTTTCCATGAGAAGCTTGATACCGAAACGTTTTTCACCTCCTACTCCTCCTTCTTCTCCACTCGCTTAGACTAGAAGTTATTCGATACTTTTTCTCCAAAAATGGAACATAGACGATAGAGTAGCTATTACAAAGCTTTTCGCAGAATTTTTGTTCTTGCGATTTTTCCTCTTTCTTTTTTTTTTTGTAAAAAATATGCCTCCGATGAAGATCCAACCCGTCGACATCGATTCACAGAAGCTGAAGGAAGCGACGGCGGTGGCTCGGAACGACGCCGTTAAGCCGGTGTTGAAATCGCGGCTGAAAAGGCTGTTCGTATTCGACCGGCAATTCCCGAGCGTGTTGAGGACTTCCTCTTCCTCATCGGAGAAACCAATCGCCGGTGAGGCTCCCCAGTCCAACAACAAAGACGGAGCCGGAACGGCAGCGTCAGAGTTCGAGCCGAGCTCCGTTTGCTTGGCGAAAATGGTGCAGAGTTTCATCGAAGAGAGTAACGATAAGCAACCACCGGCGGCGGCAGCGAAATGCGCTCGCAACCGCTGCAACTGCTTCAACGGCAACAGCAACGACAGCTCCGACGAGGAACTCGACGTCTTCGGTGAATCAATCTCCTCTGGCTCGTTCGGAGACGCCGGCGACGCGCTCAAGAGTTTGATTCCTTGCGCGAGTGTTGCGGAGAGAAACCTCTTAGCTGACACATCGAAGATCGTTGACAAAAACAGCAAGGTCTACAAACGAAAAGACGATTTGCGAAAGGTCGTCGCTGAAAGCCTTTCATCTCTCGGTTACGATTCTTCTATTTGCAAATCCAAATGGGACAAAACACCTTCTTACCCTGCCGGTGAATATGAATACATCGATGTGGTTGTGGAAGCGGAGAGGTTGATAATTGATATCGATTTTCGATCGGAGTTCGAGATAGCTCGATCGACGGGACCTACAAGGCGATCCTTCAGTCTCTGCCGTACATTTTCGTCGGGAAATCGGATCGTTTATGTCAGATCGTCGCGCCGCGTGTCGGAGGCGGCGAAGCAGAGCTTGAAGAAGAAAGGGATGCACGTTCCGCCTAATGCTACCAAGTGGCTCTCCGCCTCCTGCACCAGAGCGAATCCGTCGCCGTCCTCCGCCGTGCACCCACTCGACGGAAAACCTGAGCGCGGCGACAGTGCATCGGCAGAGAGTGACTGTGGTGAGTTGGAACTGATCTTCGGCGAGAAAGCATCTTTGCCGGAGTCGGAAACTGTTTCCGGTGGTGAGAAAAGCTCGCCGGCGGTGGAGATTCCAGCCTGGCAACCGCCGGCGGTGAAAGTGAAGAGTGTTGAGAGAGGAGCGAAGGTGGTCACCGGATTAGCCTTTCTTCTTCGAGACAAACCGTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00661	129227	131074	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000661s00022632.1	PF04720.7	DUF506	88	291	3.20E-43

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	63.262
SRR1783600	control	63.575
SRR1783602	moderate drought stress	46.157
SRR1811619	moderate drought stress	47.458

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	67.192
DRR006520	Root Summer glycyrrhizin high producing strain	66.142
DRR006521	Root Winter glycyrrhizin high producing strain	22.544
DRR006522	Root Winter glycyrrhizin high producing strain	21.889
DRR006523	Root Summer glycyrrhizin low producing strain	62.987
DRR006524	Root Summer glycyrrhizin low producing strain	62.335
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.716
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.772

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	29.792
SRR2868004	Drought Stress (root)	37.191
SRR2967015	Control (root)	40.589

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.456
SRR9715740	Leaf	4.429
SRR9715741	Leaf	3.125
SRR9715739	Root	28.132
SRR9715742	Root	25.813
SRR9715743	Root	24.621

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	33.164
SRR8749028	MeJA induced 9h	11.771
SRR8749029	MeJA induced 9h	33.369
SRR8749030	Uninduced	2.571
SRR8749031	Uninduced	14.603
SRR8749032	Uninduced	17.259

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	47.729
SRR8400027	Control - Root	47.546