Gene detail information of Glyur000661s00022628 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G76240.1 | 8.00E-64 | Arabidopsis protein of unknown function (DUF241) |
| NR | KEH36290.1 | 4.36E-151 | DUF241 domain protein [Medicago truncatula] |
| trEMBL | tr|A0A072VDQ3|A0A072VDQ3_MEDTR | 2.00E-151 | DUF241 domain protein {ECO:0000313|EMBL:KEH36290.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00661 | 111852 | 112826 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000661s00022628.1 | PF03087.9 | DUF241 | 82 | 318 | 4.20E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.268 |
| SRR1783600 | control | 0.277 |
| SRR1783602 | moderate drought stress | 0.407 |
| SRR1811619 | moderate drought stress | 0.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.230 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.050 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 58.286 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 59.016 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.658 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.314 |
| SRR2868004 | Drought Stress (root) | 7.361 |
| SRR2967015 | Control (root) | 12.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.939 |
| SRR9715740 | Leaf | 0.408 |
| SRR9715741 | Leaf | 1.752 |
| SRR9715739 | Root | 23.068 |
| SRR9715742 | Root | 27.891 |
| SRR9715743 | Root | 24.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 136.551 |
| SRR8749028 | MeJA induced 9h | 53.246 |
| SRR8749029 | MeJA induced 9h | 118.168 |
| SRR8749030 | Uninduced | 30.517 |
| SRR8749031 | Uninduced | 13.212 |
| SRR8749032 | Uninduced | 55.968 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.480 |
| SRR8400027 | Control - Root | 1.778 |