Gene detail information of Glyur000661s00022627 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35240.2 | 4.00E-88 | Protein of unknown function (DUF630 and DUF632) |
| NR | XP_007136143.1 | 0 | hypothetical protein PHAVU_009G021600g [Phaseolus vulgaris] |
| trEMBL | tr|V7AR79|V7AR79_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW08137.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00661 | 100011 | 103512 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000661s00022627.1 | PF04783.7 | DUF630 | 1 | 57 | 1.50E-18 |
| Glyur000661s00022627.1 | PF04782.7 | DUF632 | 280 | 596 | 5.80E-87 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.930 |
| SRR1783600 | control | 2.917 |
| SRR1783602 | moderate drought stress | 5.642 |
| SRR1811619 | moderate drought stress | 5.604 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.785 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.857 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.391 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.383 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.752 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.722 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.040 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.874 |
| SRR2868004 | Drought Stress (root) | 3.649 |
| SRR2967015 | Control (root) | 7.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.802 |
| SRR9715740 | Leaf | 0.527 |
| SRR9715741 | Leaf | 0.763 |
| SRR9715739 | Root | 0.175 |
| SRR9715742 | Root | 2.274 |
| SRR9715743 | Root | 1.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.369 |
| SRR8749028 | MeJA induced 9h | 0.354 |
| SRR8749029 | MeJA induced 9h | 0.134 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.694 |
| SRR8400027 | Control - Root | 5.515 |