Gene detail

Gene detail information of Glyur000661s00022626.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G35230.1	0	BR-signaling kinase 1
NR	XP_010094592.1	0	putative serine/threonine-protein kinase [Morus notabilis]
COG	YP_004863449.1	2.00E-09	serine/threonine protein kinase [Candidatus Chloracidobacterium thermophilum B]
Swissprot	tr\|Q944A7\|Y4523_ARATH	0	Probable serine/threonine-protein kinase At4g35230
trEMBL	tr\|W9R4S0\|W9R4S0_9ROSA	0	Putative serine/threonine-protein kinase {ECO:0000313\|EMBL:EXB56346.1}

Sequence

Transcript Sequence

>Glyur000661s00022626.1
ATGGGTTGCTGCATATCTCACCATTCCAAACACTCCAATACTCAACACAGCAACGATAACAACAACGTTGCCTCGTCCTCCAACGGCGCCGAAAATGCCGGCAACTTCCCCGCGGTAGACGTGCCGGCGTTCTCTGAGTTCTCACTCGCCGACCTCAGAGCCNCCACCAATGGCTTCAGTTCCGATCATATCGTCTCCGAGAGCGGCGAGAAAGCCCCCAACGTGGTCTACAAAGGCCGCCTCAACAACCATAACCGTCGCTGGATTGCCGATGAAGCTTGGGGTGTTGGGAAATTGCGACACCGGAAGCTTGCAAATTTGATTGGTTATTGCTGTGATGGGGATGAGAGGCTCCTCGTTGCAGAGTACATGCCCAATGACACTCTCGCCAAACACCTTTTCCACTGGGAAAATCGGACAATTGAGTGGAACATGCGGTTAAGAGTTGCCCTATCCATCCCTGAAGCATTAGATTATTGTAGCAACAAGGGTTATCCATTGTACCATGACTTAAATGCTTACAGAGTTCTATTTGATGAGAATGGCGATCCCCGGCTTTCATGTTTTGGTTTGATTAAAAACAGCCGGGACGGGAAAAGTTATAGCACAAATCTTGCATATACACCTCCTGAGTATCTGAGAAATGGGAGGGTGACTCCAGAAAGTGTTATCTTCAGCTTTGGGACTGTGTTATTGGATCTTCTGAGCGGCAAGCATATCCCTCCAAGTCATGCTCTTGACATGATTAGAGGTAAAAATATTCGACTCCTCATGGATTCACATTTAGAGGGAAACTTCTCAACGGAAGAGGCAACTGTGGTTTTTGATCTTGCCTCAATATGTTTGCAATACGAACCTCGGGAGCGGCCCAAGACGAAGGACCTTATTACAACACTTTCTGCTCTGCAAACTAAACCCGATGTTCCATCGTATGTTATGCTTGGAATTCCAAAGCATGAGGAAGCACCTCTTACCCCACAGCATCCTCTCTCTCCAATGGGTGAAGCTTGTTCTCGTATGGACCTCACTGCTATTCATCAGATTTTGTTGATGACAAACTACAGAGATGATGAAGGGTGTAATGAGTTGTCTTTCCAAGAATGGACCCAACAAACGAGGGATATGTTGGAGGCTAGAAAGCGCGGAGACTTGGCATTTCGTGACAAGGATTTTAAAACTTCAATTGAGAGTTACTCCCAGTTCATTGATGTTGGAACCATGGTTTCCCCAACTGTCTATGCACGGAGAAGTCTTTGCTATCTCTTCTGCGATCAACCAGATGCTGCTCTCAGAGATGCCATGCAAGCTCAATGTGTCTACCCGGACTGGTCCACAGCGTTTTACATGCAGGCGGTTGCTCTTTCCAAATTAAACATGAACAAGGATGCAGCTGACATGCTGAGTGACGCCACTGCTCTCGAAGAGAAAAGGCAACGAGGAGGGAAATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00661	94256	98808	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.16.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14500	BSK	EC:2.7.11.1	Plant hormone signal transduction	map04075

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000661s00022626.1	PF07714.12	Pkinase_Tyr	83	299	8.10E-22
Glyur000661s00022626.1	PF13414.1	TPR_11	376	436	8.40E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.112
SRR1783600	control	1.097
SRR1783602	moderate drought stress	1.809
SRR1811619	moderate drought stress	1.756

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.767
DRR006520	Root Summer glycyrrhizin high producing strain	5.698
DRR006521	Root Winter glycyrrhizin high producing strain	1.790
DRR006522	Root Winter glycyrrhizin high producing strain	1.613
DRR006523	Root Summer glycyrrhizin low producing strain	2.414
DRR006524	Root Summer glycyrrhizin low producing strain	2.580
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.446
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.476

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.477
SRR2868004	Drought Stress (root)	2.809
SRR2967015	Control (root)	4.837

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.714
SRR9715740	Leaf	2.014
SRR9715741	Leaf	1.659
SRR9715739	Root	0.323
SRR9715742	Root	0.897
SRR9715743	Root	0.863

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.750
SRR8749028	MeJA induced 9h	3.140
SRR8749029	MeJA induced 9h	4.936
SRR8749030	Uninduced	0.575
SRR8749031	Uninduced	0.261
SRR8749032	Uninduced	1.142

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.768
SRR8400027	Control - Root	6.846