Gene detail information of Glyur000660s00025392 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G12420.1 | 4.00E-139 | ACT domain repeat 8 |
| NR | KHN09770.1 | 0 | [Protein-PII] uridylyltransferase [Glycine soja] |
| COG | YP_003443996.1 | 1.00E-06 | UTP-GlnB uridylyltransferase, GlnD [Allochromatium vinosum DSM 180] |
| Swissprot | tr|Q9LNA5|ACR8_ARATH | 7.00E-179 | ACT domain-containing protein ACR8 {ECO:0000305} |
| trEMBL | tr|I1MUV8|I1MUV8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G14530.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00660 | 20738 | 22951 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000660s00025392.1 | PF01842.20 | ACT | 43 | 89 | 1.50E-07 |
| Glyur000660s00025392.1 | PF01842.20 | ACT | 253 | 312 | 1.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.123 |
| SRR1783600 | control | 4.276 |
| SRR1783602 | moderate drought stress | 5.171 |
| SRR1811619 | moderate drought stress | 5.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.945 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.461 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.190 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.630 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.214 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.614 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.638 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.607 |
| SRR2868004 | Drought Stress (root) | 14.988 |
| SRR2967015 | Control (root) | 21.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.427 |
| SRR9715740 | Leaf | 6.317 |
| SRR9715741 | Leaf | 1.716 |
| SRR9715739 | Root | 7.206 |
| SRR9715742 | Root | 4.644 |
| SRR9715743 | Root | 5.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 48.671 |
| SRR8749028 | MeJA induced 9h | 49.020 |
| SRR8749029 | MeJA induced 9h | 21.503 |
| SRR8749030 | Uninduced | 27.891 |
| SRR8749031 | Uninduced | 5.870 |
| SRR8749032 | Uninduced | 4.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.141 |
| SRR8400027 | Control - Root | 17.485 |