Gene detail information of Glyur000659s00029684 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G45970.1 | 1.00E-81 | RAC-like 2 |
| NR | AFK44689.1 | 9.75E-111 | unknown [Lotus japonicus] |
| COG | YP_003319433.1 | 5.00E-11 | small GTP-binding protein [Sphaerobacter thermophilus DSM 20745] |
| Swissprot | tr|Q6Z7L8|RAC7_ORYSJ | 1.00E-109 | Rac-like GTP-binding protein 7 (Precursor) |
| trEMBL | tr|I3SWP7|I3SWP7_LOTJA | 4.00E-111 | Uncharacterized protein {ECO:0000313|EMBL:AFK44689.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00659 | 94114 | 96263 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000659s00029684.1 | PF00071.17 | Ras | 8 | 168 | 8.50E-50 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.919 |
| SRR1783600 | control | 0.926 |
| SRR1783602 | moderate drought stress | 0.866 |
| SRR1811619 | moderate drought stress | 0.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.651 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.793 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.354 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.086 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.838 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.045 |
| SRR2868004 | Drought Stress (root) | 23.087 |
| SRR2967015 | Control (root) | 19.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.846 |
| SRR9715740 | Leaf | 0.133 |
| SRR9715741 | Leaf | 0.681 |
| SRR9715739 | Root | 0.743 |
| SRR9715742 | Root | 7.631 |
| SRR9715743 | Root | 4.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.073 |
| SRR8749029 | MeJA induced 9h | 0.006 |
| SRR8749030 | Uninduced | 0.066 |
| SRR8749031 | Uninduced | 0.198 |
| SRR8749032 | Uninduced | 0.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.078 |
| SRR8400027 | Control - Root | 27.156 |