Gene detail information of Glyur000658s00024845 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03330.2 | 6.00E-64 | Cysteine proteinases superfamily protein |
| NR | XP_004497525.1 | 0 | PREDICTED: uncharacterized protein LOC101510262 [Cicer arietinum] |
| trEMBL | tr|G7IA91|G7IA91_MEDTR | 0 | Cysteine proteinase superfamily protein {ECO:0000313|EMBL:AES60708.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00658 | 45919 | 51372 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000658s00024845.1 | PF02338.14 | OTU | 199 | 269 | 1.40E-13 |
| Glyur000658s00024845.2 | PF02338.14 | OTU | 199 | 244 | 3.50E-08 |
| Glyur000658s00024845.3 | PF02338.14 | OTU | 199 | 244 | 3.50E-08 |
| Glyur000658s00024845.4 | PF02338.14 | OTU | 199 | 244 | 3.50E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.878 |
| SRR1783600 | control | 5.998 |
| SRR1783602 | moderate drought stress | 5.280 |
| SRR1811619 | moderate drought stress | 5.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.477 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.456 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.867 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.587 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.543 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.599 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.863 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.300 |
| SRR2868004 | Drought Stress (root) | 33.998 |
| SRR2967015 | Control (root) | 28.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.423 |
| SRR9715740 | Leaf | 34.975 |
| SRR9715741 | Leaf | 45.289 |
| SRR9715739 | Root | 4.758 |
| SRR9715742 | Root | 12.388 |
| SRR9715743 | Root | 11.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.367 |
| SRR8749028 | MeJA induced 9h | 24.300 |
| SRR8749029 | MeJA induced 9h | 23.604 |
| SRR8749030 | Uninduced | 63.597 |
| SRR8749031 | Uninduced | 61.403 |
| SRR8749032 | Uninduced | 44.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.659 |
| SRR8400027 | Control - Root | 13.369 |