Gene detail information of Glyur000656s00026165 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G01710.1 | 8.00E-28 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_004509681.1 | 6.38E-123 | PREDICTED: uncharacterized protein LOC101493786 [Cicer arietinum] |
| COG | YP_006924409.1 | 4.00E-07 | chaperone protein DnaJ [Methanolobus psychrophilus R15] |
| Swissprot | tr|P0CB24|Y4865_ARATH | 2.00E-07 | Uncharacterized protein At4g38065 |
| trEMBL | tr|K7MSF9|K7MSF9_SOYBN | 1.00E-104 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G29620.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00656 | 106898 | 107695 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000656s00026165.1 | PF00226.26 | DnaJ | 76 | 139 | 9.10E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.405 |
| SRR1783600 | control | 12.650 |
| SRR1783602 | moderate drought stress | 14.328 |
| SRR1811619 | moderate drought stress | 14.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.778 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.087 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.085 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.063 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.921 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.380 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.629 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.125 |
| SRR2868004 | Drought Stress (root) | 12.887 |
| SRR2967015 | Control (root) | 17.555 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.685 |
| SRR9715740 | Leaf | 7.031 |
| SRR9715741 | Leaf | 6.622 |
| SRR9715739 | Root | 11.335 |
| SRR9715742 | Root | 7.312 |
| SRR9715743 | Root | 7.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.561 |
| SRR8749028 | MeJA induced 9h | 3.857 |
| SRR8749029 | MeJA induced 9h | 4.139 |
| SRR8749030 | Uninduced | 0.856 |
| SRR8749031 | Uninduced | 0.872 |
| SRR8749032 | Uninduced | 1.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.453 |
| SRR8400027 | Control - Root | 18.204 |