Gene detail

Gene detail information of Glyur000656s00026162

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G65460.1	kinesin like protein for actin based chloroplast movement 2
NR	XP_004509684.1	PREDICTED: geminivirus Rep-interacting motor protein-like isoform X3 [Cicer arietinum]
Swissprot	tr\|Q9LX99\|KCA1_ARATH	Kinesin-like protein KCA1
trEMBL	tr\|K7L9D8\|K7L9D8_SOYBN	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000656s00026162.1
CAATAAATAAGCTGAGAGCGAAGCGTGAAAAAACAAGAAGCGCAGAATATCATGTGAGCCAGAAAAGCCCAACAACAACACTCTCTTAACTCACAAATCACTCGTACACCAAAACGACACCGTCCCAGCGCTCCGAGACCAAAAACCAAACCAAACCAGTGAAACCACCCTTCTCCCTCCACTCATTATCACAGCCCAACATCAAAACAAAAACAAAAAGGAAGCTAGTAATAATGATAACAACCATAAAGCTCCTCTTATTTATTTTTATTTCCCTATANTTTTTATTCCCTTCCGTTTTCGCTTTTTCTCGTTTTCAAATTTTGAAGAGACGAACGAAATCTGAGAAGAGAAAGAGAAAGAGAAGCAATGGCGGAGCAAAGAAACCGTTGGAGTTGGGACGTTACCGGCTTCGAGCCGTGGAAGTCATCGCCGCCGTCGCCGTCGGCTTCGGCGCCGGTTGAGCACGACGATCGGAAACCTAATGCGCCGTTGGTGAGGAGGTTCTCCCTTTCGGCTTCATCGGTTGTTCCGCAGCACAAGCACTCCATGGCCTCGAAGCTTCAGCGGTTGAAGGACAAAGTCAAGCTTGCTAGAGAAGACTATTTGCAGTTAAGACAAGAAGCAAGTGAGCTTCAAGAATATTCAAATGCAAAACTTGACCGAGTTACACGATATCTTGGTGTTCTTGCTGAGAAAACCCNCAAGCTAGATCAAGTTGCCCTTGAAACTGAAGCAAGAATATCTCCAGTGNTCAATGAGAAAAAAAGATTGTTCAATGATTTGTTGACATCTAAAGGAAGCATACGGGTATTTTGTCGGACAAGACCATTATTTGAAGATGAAGGTCCTTCAGTTGTCGAATTTCCAGATGATTACACTATTCGTGTAAATACTAGCGATGTATCCTTGTCTAACTCGAAGAAAGATTTTGAATTTGATAAAGTTTATGGACCTCATGTTGGACAAGCTGAGTTATTCAGTGATGTCCAACCACTAGTGCAGTCAGCTTTGGATGGATATAATGTTTCCATATTTGCATATGGTCAAACCCATTCCGGAAAAACACACACTATGGAAGGATCGAGCTATGATCGGGGTTTATATGCTCGTTGTTTTGAGGAGTTGTTTGATTTAGCCAACTTGGATACAACCTCTACTTCTCAATATAAATTTTGTGTTACAGTTTGTGAGCTCTATAATGAACAGTCAAGGGATCTGCTTTTGGAGTCAGGGAAAAGCATGCCTAAACTCTGCTTGGGATCACCTGAATGTTTTGTAGAACTGGTGCAGGAGAAAGTTGATAACCCTCTGGACTTCTCTGCTGTTTTAAAAGCTGCACTTCAGAATCGGGGAAATGATTTATTAAAGATTAATGTATCTCACTTGATTGTCACAATACACATATTTTATAACAATTCGATCACCGGTGAAAACTCATATAGCAAACTCTATTTGGTTGACTTGGCTGGAAGTGAAGGTTCAATAACAGAAGATGATAGTGGTGAGCGTGTCACAGATTTGCTGCATGTAATGAAGTCACTTTCAGCGTTGGGAGATGTTTTGTCTTCTTTAACATCGAAGANGGATACTATTCCTTATGAAAATTCAATGCTAACAAAACTACTTGCAGATTCACTTGGTGGGAGTTCCAAAACCCTGATAATTGTGAATGTCTGTCCAAGTGTTTCAAATTTATCTGAGACGTTGTTGTCTCTCAATTTCTCTGCCAGAGCTCGAAATTCAGTATTAAGCCTTGGAAACCGAGATACAATTAAGAAGTGGAGAGATGTTGCGAATGATGCTCGTAAGGAGTTGTATGAGAAGGAAAAAGAAATCCATGATCTAAAGCAAGAGGGTCTGGGACTTAAGCAAGCACTTAAAGATGCAAACGATCAGTGTGTTCTACTCTTCAATGAAGTGCAGAAGGCATGGAAAGTTTCTTCTGCATTACAGACTGATTTAAAGTCAGAGCATNTTTTGCTTTCGGATAAGTATAAGATTGAGAAAGAAGAAAATACCCAGCTTAGAAATCAAGTTACTCAACTGTTACAGTTAGAGCAAGATCAAAAATTGCAGATACAACAGCAAGATTCAACCATCCAAAGTTTGCAGGTTAAAATTAAAAACCTTGAAACTCAACTCAATGAAGCTATTGGATCCAGCAAAAGTAGGTCAACGTCTGTCTCAGAGCCAGAGTCTGCTGCTCTATCTAATTCCAAACCAATTGGAGATGGCGTGGAGTCTTCTGCAATAGCCAAAAAATTAGAAGAGGAACTCAAGAAACGTGATGCTCTGATTGAGAGGTTGCATGAAGAAAATGAGAAATTATTTGACAGATTAACTGAGAAAGCATCTGCAGCTGGATCACCTAAGCTGTCAAGTCCATTATCTCGTGAATCTGTTAATGTTCAGCCTCAGAATACGGGAAGGAATGGCACCACGAACAACACAACAGCTCGCTCAATGGCTCTTTCTTCACCTTTGGCCACTGATAAGAGTGATAGCACAGTTGCTTTAGTTAAATCTGGCTCCGAAATAGTCAAGACTACCCCTGCAGGTGAATATCTTACTGCTGCTTTGAATGACTTTGATCCAGATCAATATGAAGGGCTTGCTGCCATATCTGACGGTACAAACAAGCTTTTGATGCTGGTTCTGGCTGCTGTCATCAAAGCTGGTGCTTCAAGAGAACATGAGATACTTGCTGAAATTAGGGATGCTGTTTTCTCTTTTATTAGGAAAATGGAACCAAAGCGAGTAATGGACACCATGCTTNTTTCCCGTGTTAGAATTTTGTATATAAGATCTTTACTTGCAAGGTCTCCAGAGTTGCAATCAATTAAGGTCTTGCCAGTTGAGTGCTTTCTTGAGAAGGCTAATACTGGGCGCAGTATAAGTTCCAGTCGAGGGAATAGTCCTGGAAGGTCTCCTGTGCAATATGTTGATGAGCAGATCCAGGGATTCAAAGTAAATCTAAAGCCAGAAAAGAAGTCCAAATTTTCATCTGTTGTGTTGAAGATACGTGGGATTGATCAGGACATCTGGAGACAGCAGGTAACTGGTGGGAAGCTTAGAGAAATCACTGAAGAAGCCAAAAGTTTTGCAATTGGGAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCAGCAGGTGAGCTGCAGCGCCAAATTAGATCCTGGCTTGCAGAGAACTTTGACTTTCTATCTGTTTCTGGAAATGATGCATCGGGGGGGTCAACTGGTCAGTTGGAACTTCTTTCAACTGCAATTATGGATGGTTGGATGGCTGGACTTGGTGCTGCTTTGCCTCCACACACNGATGCCCTTGGCCAGCTATTATTTGAATATTCAAAACGTGTCTATACTTCTCAACTACAGCACTTGAAGGATATTGCTGGTACCTTGGCAACAGAAGATGCTGAAGATGCAGCACAAGTAGCCAAGCTGCGTTCAGCTCTAGAATCTGTTGATCATAAAAGAAGAAAGATTCTGCAACAAATGAGAAGTGATGTAGCTTTATTGACATTGGAAAATGGGGGTTCACCTATTTCAAATCCTTCTACTGCAGCTGAAGATGCACGATTGGCATCTCTCATTTCACTTGATGGCATATTAAAGCAAATCAAGGATATCACAAGACTTTCTTCTGTGAACATCTTGAGGAAAAGTAAGAAAAGAGCAATGCTTGCTTCTCTTAATGAANTAAAAGATCAGATGCCTTCACTTCTTGAAATTGATCATCCATGTGCTCAGAGCCACATTGCAGATGCTTGCCGCATGGTTGAGTCAATTCCTGAAGAAGATGACCGCGTTCAAGATCTATCTCATGGTCGCAAACCATCAACAGATCTGGGATCTGGATCTGAAATTGATGTGGCACAGTGGAATGTACTCCAATTCAACACGGGCGCTGCCACACCATTNATAATAAAATGTGGAGCGAACTCTAATTCAGAACTAGTCATTAAAGCCGATGCTCGAGTTCAGGAACCTAAAGGTGGTGAAATTGTGAGGGTTGCCCCTAGACCCTCCATTTTGGAAAATATGAGCTTGGAGGAAATGAAANAAGTATTCTCCGAACTACCCGAGGCTCTAAGCTTGCTTGCCCTAGCGAGGACTGCGGATGGCACTCGNGCACGGTATTCTAGATTGTACAGAACCTTGGCTACAAAGGTTCCATCTCTTAGAGATTTGGTCAGTGAGCTCGAGAAAGGGGGTGCACTCAAAGATTTGATCCAAATAGTTGATGTTGAAACACGTTTGCCTTAG

Protein Sequence

>Glyur000656s00026162.1
MAEQRNRWSWDVTGFEPWKSSPPSPSASAPVEHDDRKPNAPLVRRFSLSASSVVPQHKHSMASKLQRLKDKVKLAREDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKTXKLDQVALETEARISPVXNEKKRLFNDLLTSKGSIRVFCRTRPLFEDEGPSVVEFPDDYTIRVNTSDVSLSNSKKDFEFDKVYGPHVGQAELFSDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSSYDRGLYARCFEELFDLANLDTTSTSQYKFCVTVCELYNEQSRDLLLESGKSMPKLCLGSPECFVELVQEKVDNPLDFSAVLKAALQNRGNDLLKINVSHLIVTIHIFYNNSITGENSYSKLYLVDLAGSEGSITEDDSGERVTDLLHVMKSLSALGDVLSSLTSKXDTIPYENSMLTKLLADSLGGSSKTLIIVNVCPSVSNLSETLLSLNFSARARNSVLSLGNRDTIKKWRDVANDARKELYEKEKEIHDLKQEGLGLKQALKDANDQCVLLFNEVQKAWKVSSALQTDLKSEHXLLSDKYKIEKEENTQLRNQVTQLLQLEQDQKLQIQQQDSTIQSLQVKIKNLETQLNEAIGSSKSRSTSVSEPESAALSNSKPIGDGVESSAIAKKLEEELKKRDALIERLHEENEKLFDRLTEKASAAGSPKLSSPLSRESVNVQPQNTGRNGTTNNTTARSMALSSPLATDKSDSTVALVKSGSEIVKTTPAGEYLTAALNDFDPDQYEGLAAISDGTNKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIRKMEPKRVMDTMLXSRVRILYIRSLLARSPELQSIKVLPVECFLEKANTGRSISSSRGNSPGRSPVQYVDEQIQGFKVNLKPEKKSKFSSVVLKIRGIDQDIWRQQVTGGKLREITEEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAENFDFLSVSGNDASGGSTGQLELLSTAIMDGWMAGLGAALPPHTDALGQLLFEYSKRVYTSQLQHLKDIAGTLATEDAEDAAQVAKLRSALESVDHKRRKILQQMRSDVALLTLENGGSPISNPSTAAEDARLASLISLDGILKQIKDITRLSSVNILRKSKKRAMLASLNEXKDQMPSLLEIDHPCAQSHIADACRMVESIPEEDDRVQDLSHGRKPSTDLGSGSEIDVAQWNVLQFNTGAATPXIIKCGANSNSELVIKADARVQEPKGGEIVRVAPRPSILENMSLEEMKXVFSELPEALSLLALARTADGTRARYSRLYRTLATKVPSLRDLVSELEKGGALKDLIQIVDVETRLP

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00656	87774	105722	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0007018 microtubule-based movement

GO:0009904 chloroplast accumulation movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000656s00026162.1	PF00225.18	Kinesin	152	458	4.30E-73

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.997
SRR1783600	control	9.957
SRR1783602	moderate drought stress	10.978
SRR1811619	moderate drought stress	10.944

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.910
DRR006520	Root Summer glycyrrhizin high producing strain	11.692
DRR006521	Root Winter glycyrrhizin high producing strain	7.504
DRR006522	Root Winter glycyrrhizin high producing strain	7.355
DRR006523	Root Summer glycyrrhizin low producing strain	11.225
DRR006524	Root Summer glycyrrhizin low producing strain	11.324
DRR006525	Leaf Summer glycyrrhizin high producing strain	35.557
DRR006526	Leaf Summer glycyrrhizin high producing strain	35.447

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	17.963
SRR2868004	Drought Stress (root)	16.883
SRR2967015	Control (root)	18.914

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	31.061
SRR9715740	Leaf	38.513
SRR9715741	Leaf	35.756
SRR9715739	Root	1.697
SRR9715742	Root	13.106
SRR9715743	Root	10.580

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.764
SRR8749028	MeJA induced 9h	10.333
SRR8749029	MeJA induced 9h	5.907
SRR8749030	Uninduced	5.706
SRR8749031	Uninduced	4.078
SRR8749032	Uninduced	3.892

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	21.301
SRR8400027	Control - Root	21.445