Gene detail information of Glyur000656s00026158 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38070.1 | 6.00E-105 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | KEH20138.1 | 0 | basic helix loop helix protein, putative [Medicago truncatula] |
| Swissprot | tr|P0CB23|Y4862_ARATH | 2.00E-131 | Uncharacterized protein At4g38062 |
| trEMBL | tr|A0A072TTF3|A0A072TTF3_MEDTR | 0 | Basic helix loop helix protein, putative {ECO:0000313|EMBL:KEH20138.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00656 | 72803 | 75426 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.339 |
| SRR1783600 | control | 0.342 |
| SRR1783602 | moderate drought stress | 0.180 |
| SRR1811619 | moderate drought stress | 0.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.423 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.305 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.172 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.162 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.652 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.124 |
| SRR2868004 | Drought Stress (root) | 2.006 |
| SRR2967015 | Control (root) | 2.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.930 |
| SRR9715740 | Leaf | 0.033 |
| SRR9715741 | Leaf | 0.395 |
| SRR9715739 | Root | 0.077 |
| SRR9715742 | Root | 0.061 |
| SRR9715743 | Root | 0.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.659 |
| SRR8749028 | MeJA induced 9h | 3.616 |
| SRR8749029 | MeJA induced 9h | 2.117 |
| SRR8749030 | Uninduced | 0.002 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.444 |
| SRR8400027 | Control - Root | 2.226 |