Gene detail information of Glyur000656s00026154 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH20120.1 | 5.91E-30 | hypothetical protein MTR_8g068560 [Medicago truncatula] |
| Swissprot | tr|Q8GWU7|SKI34_ARATH | 4.00E-15 | Protein SKIP34 |
| trEMBL | tr|A0A072U2S2|A0A072U2S2_MEDTR | 2.00E-30 | Uncharacterized protein {ECO:0000313|EMBL:KEH20120.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00656 | 45607 | 45879 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 48.720 |
| SRR1783600 | control | 46.999 |
| SRR1783602 | moderate drought stress | 59.805 |
| SRR1811619 | moderate drought stress | 59.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 61.132 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 63.445 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 39.802 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 41.225 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 67.899 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 69.963 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.829 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 72.504 |
| SRR2868004 | Drought Stress (root) | 73.090 |
| SRR2967015 | Control (root) | 70.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 39.500 |
| SRR9715740 | Leaf | 36.461 |
| SRR9715741 | Leaf | 32.662 |
| SRR9715739 | Root | 93.969 |
| SRR9715742 | Root | 49.119 |
| SRR9715743 | Root | 52.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 162.855 |
| SRR8749028 | MeJA induced 9h | 132.021 |
| SRR8749029 | MeJA induced 9h | 215.153 |
| SRR8749030 | Uninduced | 148.155 |
| SRR8749031 | Uninduced | 122.238 |
| SRR8749032 | Uninduced | 198.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 74.771 |
| SRR8400027 | Control - Root | 78.166 |