Gene detail information of Glyur000655s00035526 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22540.1 | 1.00E-09 | Plant protein of unknown function (DUF247) |
| NR | XP_007133913.1 | 2.98E-30 | hypothetical protein PHAVU_010G002700g [Phaseolus vulgaris] |
| trEMBL | tr|V7AJX7|V7AJX7_PHAVU | 1.00E-30 | Uncharacterized protein {ECO:0000313|EMBL:ESW05907.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00655 | 76102 | 76617 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000655s00035526.1 | PF03140.10 | DUF247 | 10 | 166 | 1.80E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.212 |
| SRR1783600 | control | 0.214 |
| SRR1783602 | moderate drought stress | 0.148 |
| SRR1811619 | moderate drought stress | 0.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.590 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.772 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.843 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.100 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.681 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.649 |
| SRR2868004 | Drought Stress (root) | 13.557 |
| SRR2967015 | Control (root) | 6.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.147 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.203 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.881 |
| SRR8749028 | MeJA induced 9h | 6.385 |
| SRR8749029 | MeJA induced 9h | 0.766 |
| SRR8749030 | Uninduced | 1.319 |
| SRR8749031 | Uninduced | 0.542 |
| SRR8749032 | Uninduced | 0.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.736 |
| SRR8400027 | Control - Root | 0.641 |