Gene detail information of Glyur000655s00035523 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13560.1 | 6.00E-17 | |
| NR | XP_004497324.1 | 8.98E-58 | PREDICTED: restin homolog isoform X1 [Cicer arietinum] |
| trEMBL | tr|A0A072W2Q0|A0A072W2Q0_MEDTR | 4.00E-56 | Uncharacterized protein {ECO:0000313|EMBL:KEH44520.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00655 | 63057 | 63589 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.029 |
| SRR1783600 | control | 6.122 |
| SRR1783602 | moderate drought stress | 7.499 |
| SRR1811619 | moderate drought stress | 8.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.909 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.955 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.219 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.056 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.292 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.301 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.741 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.463 |
| SRR2868004 | Drought Stress (root) | 0.308 |
| SRR2967015 | Control (root) | 0.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.246 |
| SRR9715740 | Leaf | 0.040 |
| SRR9715741 | Leaf | 0.083 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.039 |
| SRR9715743 | Root | 0.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.039 |
| SRR8749030 | Uninduced | 0.078 |
| SRR8749031 | Uninduced | 0.098 |
| SRR8749032 | Uninduced | 0.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.192 |
| SRR8400027 | Control - Root | 0.303 |