Gene detail information of Glyur000655s00035522 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G50150.1 | 1.00E-14 | Plant protein of unknown function (DUF247) |
| NR | KHN13314.1 | 5.94E-116 | UPF0481 protein [Glycine soja] |
| trEMBL | tr|K7K384|K7K384_SOYBN | 6.00E-114 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G28800.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00655 | 58055 | 59554 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000655s00035522.1 | PF03140.10 | DUF247 | 26 | 488 | 5.20E-54 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.146 |
| SRR1783600 | control | 0.110 |
| SRR1783602 | moderate drought stress | 0.051 |
| SRR1811619 | moderate drought stress | 0.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.289 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.284 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.806 |
| SRR2868004 | Drought Stress (root) | 3.099 |
| SRR2967015 | Control (root) | 5.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.245 |
| SRR9715740 | Leaf | 0.042 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.624 |
| SRR9715742 | Root | 9.056 |
| SRR9715743 | Root | 5.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.142 |
| SRR8749028 | MeJA induced 9h | 0.089 |
| SRR8749029 | MeJA induced 9h | 0.061 |
| SRR8749030 | Uninduced | 0.598 |
| SRR8749031 | Uninduced | 0.152 |
| SRR8749032 | Uninduced | 0.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.602 |
| SRR8400027 | Control - Root | 1.550 |