Gene detail information of Glyur000654s00029195 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67350.2 | 3.00E-36 | |
| NR | XP_006585118.1 | 1.49E-59 | PREDICTED: uncharacterized protein LOC100527551 isoform X1 [Glycine max] |
| trEMBL | tr|I1KS20|I1KS20_SOYBN | 6.00E-60 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G10970.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00654 | 83809 | 84998 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 39.305 |
| SRR1783600 | control | 39.562 |
| SRR1783602 | moderate drought stress | 20.466 |
| SRR1811619 | moderate drought stress | 20.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 62.806 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 62.817 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.534 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.976 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 38.675 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 41.413 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 49.293 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 49.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 132.346 |
| SRR2868004 | Drought Stress (root) | 129.355 |
| SRR2967015 | Control (root) | 110.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 100.651 |
| SRR9715740 | Leaf | 66.107 |
| SRR9715741 | Leaf | 86.703 |
| SRR9715739 | Root | 29.809 |
| SRR9715742 | Root | 42.166 |
| SRR9715743 | Root | 34.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.470 |
| SRR8749028 | MeJA induced 9h | 15.113 |
| SRR8749029 | MeJA induced 9h | 31.333 |
| SRR8749030 | Uninduced | 23.056 |
| SRR8749031 | Uninduced | 18.530 |
| SRR8749032 | Uninduced | 20.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 84.893 |
| SRR8400027 | Control - Root | 88.950 |