Gene detail information of Glyur000653s00025445 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36990.1 | 3.00E-14 | heat shock factor 4 |
| NR | XP_007155926.1 | 2.76E-53 | hypothetical protein PHAVU_003G244000g [Phaseolus vulgaris] |
| Swissprot | tr|P22335|HSF24_SOLPE | 1.00E-17 | Heat shock factor protein HSF24 |
| trEMBL | tr|V7CF68|V7CF68_PHAVU | 1.00E-53 | Uncharacterized protein {ECO:0000313|EMBL:ESW27920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00653 | 118412 | 118864 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.194 |
| SRR1783600 | control | 5.512 |
| SRR1783602 | moderate drought stress | 7.999 |
| SRR1811619 | moderate drought stress | 8.959 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.309 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.709 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.617 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.108 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.725 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.522 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.944 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.439 |
| SRR2868004 | Drought Stress (root) | 34.183 |
| SRR2967015 | Control (root) | 27.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.164 |
| SRR9715740 | Leaf | 3.079 |
| SRR9715741 | Leaf | 5.012 |
| SRR9715739 | Root | 21.911 |
| SRR9715742 | Root | 14.379 |
| SRR9715743 | Root | 14.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.910 |
| SRR8749028 | MeJA induced 9h | 16.946 |
| SRR8749029 | MeJA induced 9h | 56.759 |
| SRR8749030 | Uninduced | 39.956 |
| SRR8749031 | Uninduced | 44.092 |
| SRR8749032 | Uninduced | 81.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.191 |
| SRR8400027 | Control - Root | 16.707 |