Gene detail information of Glyur000653s00025433 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36945.1 | 6.00E-10 | PLC-like phosphodiesterases superfamily protein |
| NR | XP_006601503.1 | 5.78E-30 | PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Glycine max] |
| Swissprot | tr|Q93XX5|Y5713_ARATH | 2.00E-10 | PI-PLC X domain-containing protein At5g67130 (Precursor) |
| trEMBL | tr|I1LHD7|I1LHD7_SOYBN | 2.00E-30 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G05840.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00653 | 36566 | 37449 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.382 |
| SRR1783600 | control | 5.783 |
| SRR1783602 | moderate drought stress | 5.456 |
| SRR1811619 | moderate drought stress | 5.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.081 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.088 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.235 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.220 |
| SRR2868004 | Drought Stress (root) | 39.337 |
| SRR2967015 | Control (root) | 19.934 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.261 |
| SRR9715740 | Leaf | 0.546 |
| SRR9715741 | Leaf | 0.552 |
| SRR9715739 | Root | 5.890 |
| SRR9715742 | Root | 4.124 |
| SRR9715743 | Root | 4.981 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.681 |
| SRR8749028 | MeJA induced 9h | 65.723 |
| SRR8749029 | MeJA induced 9h | 21.799 |
| SRR8749030 | Uninduced | 62.056 |
| SRR8749031 | Uninduced | 97.178 |
| SRR8749032 | Uninduced | 33.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.906 |
| SRR8400027 | Control - Root | 25.037 |