Gene detail information of Glyur000653s00025432 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36945.1 | 3.00E-87 | PLC-like phosphodiesterases superfamily protein |
| NR | XP_007132000.1 | 7.73E-129 | hypothetical protein PHAVU_011G058300g [Phaseolus vulgaris] |
| COG | YP_001869900.1 | 3.00E-10 | glycoside hydrolase family protein [Nostoc punctiforme PCC 73102] |
| Swissprot | tr|Q93XX5|Y5713_ARATH | 7.00E-85 | PI-PLC X domain-containing protein At5g67130 (Precursor) |
| trEMBL | tr|V7AEN3|V7AEN3_PHAVU | 3.00E-129 | Uncharacterized protein {ECO:0000313|EMBL:ESW03994.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00653 | 35153 | 36482 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.362 |
| SRR1783600 | control | 4.413 |
| SRR1783602 | moderate drought stress | 4.421 |
| SRR1811619 | moderate drought stress | 4.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.789 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.356 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.123 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.041 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.423 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.666 |
| SRR2868004 | Drought Stress (root) | 47.258 |
| SRR2967015 | Control (root) | 19.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.262 |
| SRR9715740 | Leaf | 0.989 |
| SRR9715741 | Leaf | 1.457 |
| SRR9715739 | Root | 9.217 |
| SRR9715742 | Root | 5.850 |
| SRR9715743 | Root | 6.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.194 |
| SRR8749028 | MeJA induced 9h | 44.831 |
| SRR8749029 | MeJA induced 9h | 22.021 |
| SRR8749030 | Uninduced | 55.100 |
| SRR8749031 | Uninduced | 74.067 |
| SRR8749032 | Uninduced | 47.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.693 |
| SRR8400027 | Control - Root | 27.451 |