Gene detail

Gene detail information of Glyur000653s00025431.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G36940.1	0	nicotinate phosphoribosyltransferase 1
NR	XP_004509133.1	0	PREDICTED: nicotinate phosphoribosyltransferase-like [Cicer arietinum]
COG	YP_003089277.1	6.00E-114	nicotinate phosphoribosyltransferase [Dyadobacter fermentans DSM 18053]
trEMBL	tr\|I1K246\|I1K246_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G19580.1}

Sequence

Transcript Sequence

>Glyur000653s00025431.1
CCCGTCCCGATCGTGTTATTATACTAGGTGTTTGTTCCATGGGTGGGTGTTAGTCCATAAATCTTCTTTTTGCTATAAATAGAGCGCGCGGGGTGCAGAGGCCACAGCAACAGCACAAAGTTCAAACCATCATAAACAGAAAAAACCAACACACAAAGTCCACAGAGTCAGAGAGAGAGGGAGAGACCGAGGGTGGGGCTACGACGAGAGGAGAAGAAACAATGGAGGCGAAGGAGAACGGACCTAGCAAGCAACCTTTGAATGGAGCCGTAGATGGACCAACGAACCCGATGGTCACGCCTCTGCTCAATGACCTCTACCAATTCACCATGGCTTACGCATATTGGAAAGCTGGCAAGCATCAAGAACGTGCTGTGTTCGATTTGTATTTTCGGAAGAATCCCTTTGGTGGGGAGTATACTGTCTTTGCTGGTTTGGAAGAATGCATAAGGTTCATAGCTAATTTCAGACTCACTGAGGCGGAGATCGATTTTGTTAGGGAAAGTTTATCTGCTACTTGTGAGGATGCATTCTTTGACTATCTTAGAGGAATTGACTGCTCCGATGTTGAAGTGTATGCTATTCCAGAGGGATCGGTTGTTTTTCCTAAGATACCCCTGCTGAGAGTTGAAGGTCCAATTGCTGCTGTTCAATTGCTGGAAACTCCTTTTGTGAATCTAATTAATTATGCATCATTAGTTTCTACTAATGCTGCAAGGCATCGTAATGTTGCTGGAAAATCCAAGACTTTACTTGAGTTTGGNCTACGAAGGGCTCAGGGACCTGATGGTGGAGTAGGAGCGTCAAAGTACTGCTACATTGGTGGATTTGATGCAACAAGCAATGTTGCAGCGGGGAAGTTATTCGGGATACCCCTTCGTGGTACACATTCCCATGCCTTCGTTAGCTCATATATGAGCCTTGATGAGATTACAGACAGATCACTTTGTAGAAAAGATGGTTCAAGCACATGTGAAGATTTTGTTAGTCTGTTGTTAAATGGAGTTTTTGGTGAGACCAATCAAAGTGAGTTGGCAGCATTTATATCCTATGCATTGGCATTTCCTGATGGCTTTCTTGCCCTTGTAGATACATATGATGTTATGAGAAGTGGAATCCCTAACTTCTGTGCAGTTGCATTAGCTCTCAGGGATTTAGGATACAAATCAGTTGGCATCAGATTGGATTCTGGTGACCTTGCATATTTGTCTTGTGAGGCCAGGAAGTTCTTTTGCTCCATTGAGAAGGAATTTGGGGTGCCCGGATTTGGGAAGTTGACAATCACTGCTAGTAATGACCTCAATGAGGAAACATTAGATGCTTTAAACAAACAGGGTCATGAGGTTGATGCCTTTGGAATTGGTACATACCTCGTCACATGCTATGCTCAAGCTGCGCTAGGTGTTGTTTTCAAGCTGGTTGAGATCAATAATCAACCCCGTATCAAACTTTCTGAAGATGTGTCAAAGGTCTCTATCCCACGTAAGAAGCGATGCTATAGGTTGTATGGGAAAGAAGGATATCCCCTGGTAGACATAATGACTGGAGAAGATGAACCCTCTCCAAAGGTGGGCGAAAGAATCCTGTGTCGTCATCCCTTCCAGGAATCCAAGAGAGCGTATGTAGTGCCACAGCATGTTGAGGAGCTTCTAAGGTGTTACTGGCCTGGGAATTCAGATAANAAGAGAGAAACTTTACCACCTCTAAGAGACATTAGAGAGCGATGCATCANGCAACTTGAGCAAATGCGACCTGACCACATGAGGAAACTTAACCCAACTCCATATAAGGTTAGTGTAAGTGCAAAGTTATATGAATTCATTCATTTCCTGTGGCTCAATGAGGCACCAGTTGGGGAGCTGCAGTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00653	24006	33093	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00763	pncB, NAPRT1	EC:6.3.4.21	Nicotinate and nicotinamide metabolism	map00760

Gene Ontology

biological_process

GO:0009435 NAD biosynthetic process

GO:0019358 nicotinate nucleotide salvage

molecular_function

GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity

GO:0004516 nicotinate phosphoribosyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000653s00025431.1	PF04095.11	NAPRTase	177	240	2.50E-09
Glyur000653s00025431.1	PF04095.11	NAPRTase	283	424	3.90E-23

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.718
SRR1783600	control	11.661
SRR1783602	moderate drought stress	10.360
SRR1811619	moderate drought stress	10.038

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.492
DRR006520	Root Summer glycyrrhizin high producing strain	9.616
DRR006521	Root Winter glycyrrhizin high producing strain	28.622
DRR006522	Root Winter glycyrrhizin high producing strain	27.401
DRR006523	Root Summer glycyrrhizin low producing strain	17.259
DRR006524	Root Summer glycyrrhizin low producing strain	16.838
DRR006525	Leaf Summer glycyrrhizin high producing strain	21.847
DRR006526	Leaf Summer glycyrrhizin high producing strain	21.363

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	53.611
SRR2868004	Drought Stress (root)	93.175
SRR2967015	Control (root)	48.995

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	47.469
SRR9715740	Leaf	43.540
SRR9715741	Leaf	54.236
SRR9715739	Root	9.463
SRR9715742	Root	37.664
SRR9715743	Root	31.766

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	27.849
SRR8749028	MeJA induced 9h	25.509
SRR8749029	MeJA induced 9h	29.354
SRR8749030	Uninduced	61.759
SRR8749031	Uninduced	58.630
SRR8749032	Uninduced	61.909

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	43.834
SRR8400027	Control - Root	36.579