Gene detail information of Glyur000652s00019438 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32280.1 | 6.00E-42 | Protein of unknown function (DUF1218) |
| NR | XP_004487365.1 | 3.50E-89 | PREDICTED: uncharacterized protein LOC101491166 [Cicer arietinum] |
| trEMBL | tr|I1LRU0|I1LRU0_SOYBN | 3.00E-80 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G11100.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00652 | 90425 | 91238 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000652s00019438.1 | PF06749.7 | DUF1218 | 41 | 131 | 6.70E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.580 |
| SRR1783600 | control | 4.243 |
| SRR1783602 | moderate drought stress | 1.538 |
| SRR1811619 | moderate drought stress | 1.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.849 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.681 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.254 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.248 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.981 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.804 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.423 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.227 |
| SRR2868004 | Drought Stress (root) | 10.591 |
| SRR2967015 | Control (root) | 7.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.419 |
| SRR9715740 | Leaf | 0.232 |
| SRR9715741 | Leaf | 1.409 |
| SRR9715739 | Root | 2.044 |
| SRR9715742 | Root | 3.336 |
| SRR9715743 | Root | 3.407 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.041 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.046 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.110 |
| SRR8400027 | Control - Root | 2.718 |