Gene detail information of Glyur000652s00019432 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54680.1 | 5.00E-49 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_004487368.1 | 4.25E-115 | PREDICTED: transcription factor bHLH115-like [Cicer arietinum] |
| Swissprot | tr|Q9FH37|ILR3_ARATH | 1.00E-59 | Transcription factor ILR3 |
| trEMBL | tr|I1M411|I1M411_SOYBN | 3.00E-110 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G38140.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00652 | 67448 | 69623 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 33.385 |
| SRR1783600 | control | 33.651 |
| SRR1783602 | moderate drought stress | 24.379 |
| SRR1811619 | moderate drought stress | 24.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.733 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.043 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.143 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.656 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.830 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.369 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 170.623 |
| SRR2868004 | Drought Stress (root) | 134.666 |
| SRR2967015 | Control (root) | 51.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.248 |
| SRR9715740 | Leaf | 0.150 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 11.695 |
| SRR9715742 | Root | 27.502 |
| SRR9715743 | Root | 26.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.252 |
| SRR8749028 | MeJA induced 9h | 0.089 |
| SRR8749029 | MeJA induced 9h | 0.448 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.296 |
| SRR8749032 | Uninduced | 0.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 82.296 |
| SRR8400027 | Control - Root | 55.559 |