Gene detail information of Glyur000652s00019431 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32300.1 | 6.00E-27 | uclacyanin 1 |
| NR | XP_004487369.1 | 3.35E-101 | PREDICTED: blue copper protein-like [Cicer arietinum] |
| Swissprot | tr|P80728|MAVI_CUCPE | 7.00E-17 | Mavicyanin |
| trEMBL | tr|I3SDR0|I3SDR0_MEDTR | 2.00E-99 | Uncharacterized protein {ECO:0000313|EMBL:AFK38402.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00652 | 65721 | 66657 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000652s00019431.1 | PF02298.12 | Cu_bind_like | 38 | 106 | 5.40E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.756 |
| SRR1783600 | control | 5.632 |
| SRR1783602 | moderate drought stress | 4.353 |
| SRR1811619 | moderate drought stress | 4.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.472 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.468 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.442 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.400 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.683 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.736 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 155.901 |
| SRR2868004 | Drought Stress (root) | 102.590 |
| SRR2967015 | Control (root) | 61.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 21.861 |
| SRR9715742 | Root | 7.394 |
| SRR9715743 | Root | 12.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 122.847 |
| SRR8400027 | Control - Root | 84.344 |