Gene detail information of Glyur000652s00019429 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22060.1 | 3.00E-68 | Receptor-like protein kinase-related family protein |
| NR | AES67291.2 | 2.17E-146 | cysteine-rich RLK (receptor-like kinase) protein [Medicago truncatula] |
| Swissprot | tr|Q9LRJ9|CRR38_ARATH | 1.00E-84 | Cysteine-rich repeat secretory protein 38 (Precursor) |
| trEMBL | tr|G7IKM1|G7IKM1_MEDTR | 8.00E-147 | Cysteine-rich RLK (Receptor-like kinase) protein {ECO:0000313|EMBL:AES67291.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00652 | 61806 | 62543 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000652s00019429.1 | PF01657.12 | Stress-antifung | 31 | 129 | 1.50E-26 |
| Glyur000652s00019429.1 | PF01657.12 | Stress-antifung | 147 | 242 | 1.30E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.940 |
| SRR1783600 | control | 13.614 |
| SRR1783602 | moderate drought stress | 3.257 |
| SRR1811619 | moderate drought stress | 3.429 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 56.620 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 57.450 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 87.184 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 85.959 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 50.167 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 54.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.801 |
| SRR2868004 | Drought Stress (root) | 12.400 |
| SRR2967015 | Control (root) | 14.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 57.948 |
| SRR9715740 | Leaf | 33.090 |
| SRR9715741 | Leaf | 56.697 |
| SRR9715739 | Root | 11.728 |
| SRR9715742 | Root | 56.117 |
| SRR9715743 | Root | 48.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 194.697 |
| SRR8749028 | MeJA induced 9h | 451.794 |
| SRR8749029 | MeJA induced 9h | 328.875 |
| SRR8749030 | Uninduced | 471.800 |
| SRR8749031 | Uninduced | 621.024 |
| SRR8749032 | Uninduced | 499.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.617 |
| SRR8400027 | Control - Root | 26.160 |