Gene detail information of Glyur000652s00019428 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05280.1 | 1.00E-107 | Protein of unknown function (DUF604) |
| NR | XP_004487370.1 | 0 | PREDICTED: uncharacterized protein LOC101493127 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7IKL7|G7IKL7_MEDTR | 0 | Transferring glycosyl group transferase {ECO:0000313|EMBL:AES67287.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00652 | 56735 | 58957 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000652s00019428.1 | PF04646.7 | DUF604 | 205 | 264 | 2.80E-25 |
| Glyur000652s00019428.1 | PF04646.7 | DUF604 | 265 | 423 | 1.10E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.755 |
| SRR1783600 | control | 0.766 |
| SRR1783602 | moderate drought stress | 0.204 |
| SRR1811619 | moderate drought stress | 0.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.506 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.515 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.160 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.868 |
| SRR2868004 | Drought Stress (root) | 1.979 |
| SRR2967015 | Control (root) | 1.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.400 |
| SRR9715740 | Leaf | 0.102 |
| SRR9715741 | Leaf | 0.279 |
| SRR9715739 | Root | 0.082 |
| SRR9715742 | Root | 0.122 |
| SRR9715743 | Root | 0.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.091 |
| SRR8749028 | MeJA induced 9h | 12.711 |
| SRR8749029 | MeJA induced 9h | 7.147 |
| SRR8749030 | Uninduced | 3.561 |
| SRR8749031 | Uninduced | 1.425 |
| SRR8749032 | Uninduced | 1.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.280 |
| SRR8400027 | Control - Root | 0.230 |