Gene detail information of Glyur000652s00019426 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22060.1 | 2.00E-64 | Receptor-like protein kinase-related family protein |
| NR | XP_003541936.1 | 2.10E-134 | PREDICTED: cysteine-rich repeat secretory protein 38-like [Glycine max] |
| Swissprot | tr|Q9LRJ9|CRR38_ARATH | 4.00E-79 | Cysteine-rich repeat secretory protein 38 (Precursor) |
| trEMBL | tr|K7M2U5|K7M2U5_SOYBN | 8.00E-135 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G38190.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00652 | 53857 | 54588 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000652s00019426.1 | PF01657.12 | Stress-antifung | 31 | 128 | 1.20E-25 |
| Glyur000652s00019426.1 | PF01657.12 | Stress-antifung | 148 | 240 | 9.80E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.045 |
| SRR1783600 | control | 0.100 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.148 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.147 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.402 |
| SRR2868004 | Drought Stress (root) | 1.768 |
| SRR2967015 | Control (root) | 1.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.357 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.085 |
| SRR9715743 | Root | 0.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.669 |
| SRR8749028 | MeJA induced 9h | 1.759 |
| SRR8749029 | MeJA induced 9h | 1.627 |
| SRR8749030 | Uninduced | 75.467 |
| SRR8749031 | Uninduced | 17.528 |
| SRR8749032 | Uninduced | 5.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.094 |
| SRR8400027 | Control - Root | 2.091 |