Gene detail information of Glyur000652s00019423 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G35730.1 | 2.00E-162 | EXS (ERD1/XPR1/SYG1) family protein |
| NR | XP_006594887.1 | 0 | PREDICTED: SPX and EXS domain-containing protein 1-like isoform X5 [Glycine max] |
| Swissprot | tr|Q6K991|PHO12_ORYSJ | 6.00E-20 | Phosphate transporter PHO1-2 |
| trEMBL | tr|I1M420|I1M420_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G38260.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00652 | 31800 | 41814 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000652s00019423.1 | PF03124.9 | EXS | 110 | 227 | 4.20E-22 |
| Glyur000652s00019423.1 | PF03124.9 | EXS | 291 | 367 | 2.80E-10 |
| Glyur000652s00019423.1 | PF03124.9 | EXS | 368 | 465 | 2.10E-27 |
| Glyur000652s00019423.2 | PF03124.9 | EXS | 105 | 222 | 4.10E-22 |
| Glyur000652s00019423.2 | PF03124.9 | EXS | 286 | 362 | 2.80E-10 |
| Glyur000652s00019423.2 | PF03124.9 | EXS | 363 | 460 | 2.10E-27 |
| Glyur000652s00019423.3 | PF03124.9 | EXS | 110 | 227 | 4.20E-22 |
| Glyur000652s00019423.3 | PF03124.9 | EXS | 291 | 367 | 2.80E-10 |
| Glyur000652s00019423.3 | PF03124.9 | EXS | 368 | 465 | 2.10E-27 |
| Glyur000652s00019423.4 | PF08613.6 | Cyclin | 31 | 173 | 1.00E-33 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.154 |
| SRR1783600 | control | 4.097 |
| SRR1783602 | moderate drought stress | 4.797 |
| SRR1811619 | moderate drought stress | 3.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.064 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.018 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.939 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.691 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.687 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.672 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.890 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.681 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.254 |
| SRR2868004 | Drought Stress (root) | 15.877 |
| SRR2967015 | Control (root) | 13.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.126 |
| SRR9715740 | Leaf | 20.758 |
| SRR9715741 | Leaf | 19.902 |
| SRR9715739 | Root | 3.384 |
| SRR9715742 | Root | 6.014 |
| SRR9715743 | Root | 6.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.083 |
| SRR8749028 | MeJA induced 9h | 11.776 |
| SRR8749029 | MeJA induced 9h | 7.201 |
| SRR8749030 | Uninduced | 7.869 |
| SRR8749031 | Uninduced | 6.952 |
| SRR8749032 | Uninduced | 5.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.903 |
| SRR8400027 | Control - Root | 12.918 |