Gene detail information of Glyur000652s00019421 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G21820.1 | 4.00E-167 | histone-lysine N-methyltransferase ATXR2 |
| NR | XP_004516944.1 | 0 | PREDICTED: histone-lysine N-methyltransferase ATXR2-like [Cicer arietinum] |
| Swissprot | tr|Q5PP37|ATXR2_ARATH | 0 | Histone-lysine N-methyltransferase ATXR2 |
| trEMBL | tr|V7BVB9|V7BVB9_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW21952.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00652 | 20056 | 25702 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000652s00019421.1 | PF01753.13 | zf-MYND | 180 | 210 | 2.40E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.004 |
| SRR1783600 | control | 8.235 |
| SRR1783602 | moderate drought stress | 7.940 |
| SRR1811619 | moderate drought stress | 7.747 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.447 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.108 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.365 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.682 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.147 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.483 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.886 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.246 |
| SRR2868004 | Drought Stress (root) | 13.660 |
| SRR2967015 | Control (root) | 15.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.268 |
| SRR9715740 | Leaf | 7.129 |
| SRR9715741 | Leaf | 6.687 |
| SRR9715739 | Root | 2.421 |
| SRR9715742 | Root | 6.057 |
| SRR9715743 | Root | 4.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.003 |
| SRR8749028 | MeJA induced 9h | 12.303 |
| SRR8749029 | MeJA induced 9h | 10.755 |
| SRR8749030 | Uninduced | 7.399 |
| SRR8749031 | Uninduced | 4.581 |
| SRR8749032 | Uninduced | 5.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.424 |
| SRR8400027 | Control - Root | 12.278 |