Gene detail information of Glyur000651s00026839 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09390.1 | 2.00E-11 | metallothionein 2A |
| NR | XP_007140314.1 | 6.09E-28 | hypothetical protein PHAVU_008G101800g [Phaseolus vulgaris] |
| Swissprot | tr|Q39459|MT2_CICAR | 2.00E-25 | Metallothionein-like protein 2 |
| trEMBL | tr|V7B633|V7B633_PHAVU | 2.00E-28 | Uncharacterized protein {ECO:0000313|EMBL:ESW12308.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00651 | 93683 | 95296 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000651s00026839.1 | PF01439.13 | Metallothio_2 | 59 | 129 | 5.10E-21 |
| Glyur000651s00026839.2 | PF01439.13 | Metallothio_2 | 1 | 78 | 6.60E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5450.583 |
| SRR1783600 | control | 5456.644 |
| SRR1783602 | moderate drought stress | 21239.262 |
| SRR1811619 | moderate drought stress | 21082.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11272.525 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11150.824 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17673.428 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17213.127 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13879.231 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13885.429 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6920.214 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6885.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5254.876 |
| SRR2868004 | Drought Stress (root) | 6633.972 |
| SRR2967015 | Control (root) | 6395.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2971.824 |
| SRR9715740 | Leaf | 4546.935 |
| SRR9715741 | Leaf | 3605.373 |
| SRR9715739 | Root | 7192.350 |
| SRR9715742 | Root | 6976.976 |
| SRR9715743 | Root | 6824.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 564.447 |
| SRR8749028 | MeJA induced 9h | 1049.510 |
| SRR8749029 | MeJA induced 9h | 1206.081 |
| SRR8749030 | Uninduced | 631.884 |
| SRR8749031 | Uninduced | 366.348 |
| SRR8749032 | Uninduced | 734.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9660.562 |
| SRR8400027 | Control - Root | 11350.412 |