Gene detail information of Glyur000649s00025287.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G18270.1 | 7.00E-87 | translocase 11 |
| NR | XP_004486032.1 | 0 | PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase homolog [Cicer arietinum] |
| COG | YP_007093429.1 | 2.00E-60 | Phospho-N-acetylmuramoyl-pentapeptide-transferase [Chroococcidiopsis thermalis PCC 7203] |
| Swissprot | tr|O49730|MRAY_ARATH | 2.00E-129 | Phospho-N-acetylmuramoyl-pentapeptide-transferase homolog |
| trEMBL | tr|K7M130|K7M130_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G28871.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00649 | 91621 | 97384 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01000 | mraY | EC:2.7.8.13 | Peptidoglycan biosynthesis | map00550 |
| Vancomycin resistance | map01502 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000649s00025287.1 | PF00953.16 | Glycos_transf_4 | 255 | 419 | 1.70E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.698 |
| SRR1783600 | control | 1.796 |
| SRR1783602 | moderate drought stress | 2.466 |
| SRR1811619 | moderate drought stress | 2.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.002 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.084 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.014 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.946 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.464 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.337 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.179 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.222 |
| SRR2868004 | Drought Stress (root) | 9.028 |
| SRR2967015 | Control (root) | 8.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.085 |
| SRR9715740 | Leaf | 0.372 |
| SRR9715741 | Leaf | 0.049 |
| SRR9715739 | Root | 1.239 |
| SRR9715742 | Root | 0.627 |
| SRR9715743 | Root | 1.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.111 |
| SRR8749028 | MeJA induced 9h | 3.064 |
| SRR8749029 | MeJA induced 9h | 0.968 |
| SRR8749030 | Uninduced | 2.237 |
| SRR8749031 | Uninduced | 1.006 |
| SRR8749032 | Uninduced | 0.447 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.353 |
| SRR8400027 | Control - Root | 5.870 |