Gene detail information of Glyur000649s00025278 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007147903.1 | 1.92E-41 | hypothetical protein PHAVU_006G164600g [Phaseolus vulgaris] |
| trEMBL | tr|V7BPK0|V7BPK0_PHAVU | 7.00E-42 | Uncharacterized protein {ECO:0000313|EMBL:ESW19897.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00649 | 37099 | 37542 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000649s00025278.1 | PF05938.6 | Self-incomp_S1 | 58 | 144 | 0.00016 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.379 |
| SRR1783600 | control | 1.403 |
| SRR1783602 | moderate drought stress | 1.062 |
| SRR1811619 | moderate drought stress | 0.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.835 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.411 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.390 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.495 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.253 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.701 |
| SRR2868004 | Drought Stress (root) | 2.222 |
| SRR2967015 | Control (root) | 1.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.838 |
| SRR9715740 | Leaf | 0.713 |
| SRR9715741 | Leaf | 0.668 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.649 |
| SRR9715743 | Root | 1.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.070 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.249 |
| SRR8400027 | Control - Root | 1.910 |