Gene detail

Gene detail information of Glyur000647s00023054

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G38220.2	2.00E-168	Peptidase M20/M25/M40 family protein
NR	XP_004498100.1	0	PREDICTED: aminoacylase-1-like isoform X1 [Cicer arietinum]
COG	YP_003836017.1	2.00E-28	peptidase M20 [Micromonospora aurantiaca ATCC 27029]
trEMBL	tr\|A0A072VH72\|A0A072VH72_MEDTR	0	Aminoacylase-1 {ECO:0000256\|PIRNR:PIRNR036696}

Sequence

Transcript Sequence

>Glyur000647s00023054.1
GCTGCTTTCCTTTCTCTCCTTTCCTTTCCCTTTGCTTTCATCCCATCCGTTTTGTCTTTTTTGAGGTTGTCCGGCCAGGTGTGATAAGATTATCTAAGGATGAAGAATAAGCAGCAAGCAGCAAGCAGCGACATCATTGTCACAATCATCAACGACACAAACCAAACTACATTCTCTACTCACCTCCACCGCTTTGTTCCATTCTCTATACCCTTCACCAACAACACCGCCCTTTTGCCTTCTACACTTCCAGATTCATCTTAATTATTGGTTGTCATTTGTTTTTCCTCTTTGGACAGAANTTTTCGATGCTGTGAGCGTGGTGGCTGTTTTGACAATACCCGGATATTGAGTGAGTGAGTGTTGAGTGTGGATGATGGAGTTGAGTTTGCGGAAGACCCTCCTTGCACTTGCAGCATTGTTATTAGTAGCAATAGCAGTGATAGGGTCATCATCAATAACTACAACAGCGGTTGAATTTGAAGGTTCATCTTCAGAATCAAAATCAGAGGAAGCAGCAAAGATCATAAATCGGTTCCAGCAATACTTGCAAATCCGGACAGACCAACCGAGCCCGCGCTATGAGGAAGTAGCGGAGTTCCTGAGATCAGAGGGGAAATCCCTCTCATTGGAATCCCAAACTATCGAGTTGGTGCCAGGGAAGCCATTAGTCCTTTTGAAATGGGGCGGCACCAACCCTGAACTCCCTTCCATCATGCTATACTCCCACACCGACGTGGTCCCCGCCGAGGAAGACAAGTGGACCCACGACCCTTTCAGGGCCCACATTGACGCCCGCGGACGCATCTATGCCAGAGGGTCACAGGACATGAAGTGCGTCGGCATGCAGTACCTTGAGGCCGTTCGCCGCCTCAAGGCCCAATCCTTTCAGCCCAAACGCTCCATCTACTTGGTCTTCGCACCCGACGAGGAGATTGGCGGACACGACGGTGCTGAAAAGTTCTCCCACTCTCAGATCTTCCAACAGCTGAACGTTGGCATAGTGCTTGATGAAGGATTGGCTTCGCCGGATGAGCATTATAGGGCGTTCTACGCGGAGAGGTGCCCGTGGTGGCTGGTGATCAAGGCCATTGGGGCTCCCGGACATGGGTCCAAGCTTTATGATAACTCTGCCATGGAGAATCTCTTGAAGAGTATTGAAAGCATCAGGAGGTACCGTGCCTCACAACTGGACATGATCAAGGCTGGCTTGAAGGCTGATGGGGATGTTGTTTCTGTTAATATGGCCTTTTTGAAGGCTGGAACTCCGTCTCCAACTGGTTTTGTCATGAATTTGCAGCCATCTGAAGCTGAAGCTGGATTTGATATCAGGGTGCCGCCAACTGCCGATGCAGAATCACTGGAGAGACGCATTGCCGAAGAATGGGCACCTACTTGGCGCAACATGTCATTCACTCTCGGCCAGTTCAAACAGAAGGTACCTGTGTATGGCAAGGATGGGAAACCAGTCATCACCAAAACCGACAGCTCAAATCCCTGGTGGGCACTGTTAGAAAATGCTGTCCAAGAGGCTGGTGGGAAACTCGGCAAGCCAGAGATCTTTCCTGCCTCCACGGATGCACGCTATTTCCGCAATCATGGATTGCCAGCAATTGGATTCTCACCTATGGCAAACACTCCTATTCTACTGCATGACCACAATGAGAACTTGAAAGTGAGGCTTGCATTACATCCTAATTGGGACAATGCCTTCATGAAGATGTTCAAATCTAGAAACAGCCTCTCCACTTCTGGGGGTAAGGCTGCATACGTCTATCCTCCCCAGACCCCATATGGTGGGAGCCTCATGCACTGGTGTGAAATTACACTACTATTCGTCTTTCCTCTATCCTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00647	40449	45124	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14677	ACY1	EC:3.5.1.14	2-Oxocarboxylic acid metabolism	map01210
			Biosynthesis of amino acids	map01230
			Arginine biosynthesis	map00220

Gene Ontology

biological_process

GO:0006508 proteolysis

GO:0006520 cellular amino acid metabolic process

GO:0008152 metabolic process

cellular_component
GO:0005737 cytoplasm

molecular_function

GO:0004046 aminoacylase activity

GO:0008237 metallopeptidase activity

GO:0016787 hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000647s00023054.1	PF01546.23	Peptidase_M20	115	435	1.80E-35
Glyur000647s00023054.1	PF07687.9	M20_dimer	229	336	7.60E-05

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	77.667
SRR1783600	control	78.055
SRR1783602	moderate drought stress	54.506
SRR1811619	moderate drought stress	54.108

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	69.954
DRR006520	Root Summer glycyrrhizin high producing strain	69.149
DRR006521	Root Winter glycyrrhizin high producing strain	43.274
DRR006522	Root Winter glycyrrhizin high producing strain	42.732
DRR006523	Root Summer glycyrrhizin low producing strain	61.147
DRR006524	Root Summer glycyrrhizin low producing strain	60.238
DRR006525	Leaf Summer glycyrrhizin high producing strain	33.246
DRR006526	Leaf Summer glycyrrhizin high producing strain	33.010

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	41.606
SRR2868004	Drought Stress (root)	37.485
SRR2967015	Control (root)	33.848

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	24.426
SRR9715740	Leaf	23.814
SRR9715741	Leaf	19.607
SRR9715739	Root	39.120
SRR9715742	Root	52.556
SRR9715743	Root	48.428

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.057
SRR8749028	MeJA induced 9h	14.400
SRR8749029	MeJA induced 9h	7.678
SRR8749030	Uninduced	5.165
SRR8749031	Uninduced	2.605
SRR8749032	Uninduced	4.962

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	60.573
SRR8400027	Control - Root	62.758