Gene detail information of Glyur000644s00020345 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G14110.1 | 5.00E-70 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
| NR | AFK45452.1 | 1.24E-103 | unknown [Medicago truncatula] |
| trEMBL | tr|I3SYW0|I3SYW0_MEDTR | 5.00E-104 | Uncharacterized protein {ECO:0000313|EMBL:AFK45452.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00644 | 44249 | 45490 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000644s00020345.1 | PF12689.2 | Acid_PPase | 21 | 164 | 9.00E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.588 |
| SRR1783600 | control | 0.595 |
| SRR1783602 | moderate drought stress | 0.571 |
| SRR1811619 | moderate drought stress | 0.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.361 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.284 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.118 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.135 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.275 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.274 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 64.461 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 64.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.535 |
| SRR2868004 | Drought Stress (root) | 7.970 |
| SRR2967015 | Control (root) | 3.572 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 47.533 |
| SRR9715740 | Leaf | 71.125 |
| SRR9715741 | Leaf | 30.313 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.850 |
| SRR9715743 | Root | 0.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.188 |
| SRR8749028 | MeJA induced 9h | 3.004 |
| SRR8749029 | MeJA induced 9h | 5.888 |
| SRR8749030 | Uninduced | 2.597 |
| SRR8749031 | Uninduced | 1.941 |
| SRR8749032 | Uninduced | 2.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.066 |
| SRR8400027 | Control - Root | 2.717 |