Gene detail

Gene detail information of Glyur000643s00026945

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G29670.1	6.00E-69	HXXXD-type acyl-transferase family protein
NR	XP_003551761.1	0	PREDICTED: phenolic glucoside malonyltransferase 1-like [Glycine max]
Swissprot	tr\|Q9LRQ8\|PMAT2_ARATH	4.00E-94	Phenolic glucoside malonyltransferase 2
trEMBL	tr\|I1N4L5\|I1N4L5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G50350.1}

Sequence

Transcript Sequence

>Glyur000643s00026945.1
ATGGAAGTTTTCAATGTAGCACCGGCTTTGGGATCTAACCAGTTACCAACTGAAACATCAATTCCTCTCACCTTCTTTGACATACTGTGGTTAAGGCTACCTCCAGTTGAACGCATTTTCTTCTATGAATTCCCTCACCAAACCCCACTCTTCTTCGATACCCTTCTTCCCAAACTCAAACATTCCCTCTCCCTTGTACTTTCGCACTTCTACCCCCTCGCTGGCCACCTCACTTGGCCNCTTCACTCCAACACACCCATCATCAAATACCACAAAGGTGACACTGTTTCCCTCACCGTAGCTGAATCTGATGCTGATTTCAACCACCTAGCTGGCACCGATCTATGTGAAGCCACACAAATTCACCATCTTTTACCCCATTTGGCCATATCCCATGAACAAGCCAATGTGTTGGCCCTCCAAGTTACTCTTTTTCCAAGCTCTGGATTTTCCATTGGAATCACCTCCCACCATGCTGTTCTAGATGGTAAAACTTCAACATCGTTTATCAAATCGTGGGCTTATCTATGTACCAAGCTAGAAGAATCTGAATCAGCCTCTTCTTTGCCACCTGAACTGTATCCTTTCTATGACAGGGAATGTGGACCAAACAACAGAAGCCTCATGGTTTGGGATATCAAAGTTCCAGAAGAGTCAACTAGAGGCTTATTCCTATTGACTCGCTCCGATATCGAAAAGCTCAAGCAATTTGTAGTGTCAAAGCAGAAGGGGAAGAACAAAAGCCTTCACTTGTCAANTTTTGTTCTATCTATGGCCTATGCATGGGTATGCAGAGTGAAAGCAGAGGAAATAAAAAACAAGAGGGTTTTGCTGGGTGTGAGTGTTGATTGCAGGCCTCGCTTGGAGCCACCTCTTCCTGCAACATACTTTGGAAATTGTGTTGGTGGAAGACTTGCAGTTGCTGAAACAAGGGAATTATTGGGAGAAGATGGACTAGTTGTGGCTGTGGAAGTNCTGAGTGAAACTTTGGAAAATCTGAAGAAAGATGGAGTGCTGAGTGGAGCAGAGAATTGGTCAAAGTTGTTGATTGAGGGTCTTGCCACNGATGACAAAACAATTGGCGTTGCTGGGTCACCCAGGTTTGAGGTTTATAGCAGTGATTTTGGGTGGGGAAGACCAAAGAAGGTGGAAATGGCTTCTATAGATAGAACTGCAGCATTTGCTTTTTCAGACAGTAAAAATGGTGATGGGGTTGAGATTGGTTTGGTGTCCAAGAAAAGAGCAATGGAAGCCTTTGCTTCTCTCTTTGTCCAAGGAATTATTGCATCTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00643	112351	113698	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000643s00026945.1	PF02458.10	Transferase	16	421	4.00E-53

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.976
SRR1783600	control	1.886
SRR1783602	moderate drought stress	1.392
SRR1811619	moderate drought stress	1.319

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.549
DRR006520	Root Summer glycyrrhizin high producing strain	0.365
DRR006521	Root Winter glycyrrhizin high producing strain	0.052
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.179
DRR006524	Root Summer glycyrrhizin low producing strain	0.279
DRR006525	Leaf Summer glycyrrhizin high producing strain	20.449
DRR006526	Leaf Summer glycyrrhizin high producing strain	20.157

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.988
SRR2868004	Drought Stress (root)	5.558
SRR2967015	Control (root)	4.197

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	28.281
SRR9715740	Leaf	28.805
SRR9715741	Leaf	45.156
SRR9715739	Root	1.529
SRR9715742	Root	2.738
SRR9715743	Root	2.630

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.008
SRR8749028	MeJA induced 9h	3.525
SRR8749029	MeJA induced 9h	3.472
SRR8749030	Uninduced	0.829
SRR8749031	Uninduced	0.245
SRR8749032	Uninduced	0.594

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.324
SRR8400027	Control - Root	2.501