Gene detail information of Glyur000643s00026944 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G39050.1 | 5.00E-74 | HXXXD-type acyl-transferase family protein |
| NR | XP_003551761.1 | 0 | PREDICTED: phenolic glucoside malonyltransferase 1-like [Glycine max] |
| Swissprot | tr|Q9LRQ8|PMAT2_ARATH | 5.00E-100 | Phenolic glucoside malonyltransferase 2 |
| trEMBL | tr|I1N4L5|I1N4L5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G50350.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00643 | 107619 | 108986 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000643s00026944.1 | PF02458.10 | Transferase | 21 | 446 | 4.60E-50 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 44.428 |
| SRR1783600 | control | 44.909 |
| SRR1783602 | moderate drought stress | 40.633 |
| SRR1811619 | moderate drought stress | 40.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.668 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.907 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.840 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.076 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.389 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.192 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.869 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 50.227 |
| SRR2868004 | Drought Stress (root) | 45.779 |
| SRR2967015 | Control (root) | 33.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.815 |
| SRR9715740 | Leaf | 6.767 |
| SRR9715741 | Leaf | 22.820 |
| SRR9715739 | Root | 17.922 |
| SRR9715742 | Root | 32.647 |
| SRR9715743 | Root | 28.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.444 |
| SRR8749028 | MeJA induced 9h | 16.414 |
| SRR8749029 | MeJA induced 9h | 6.469 |
| SRR8749030 | Uninduced | 25.685 |
| SRR8749031 | Uninduced | 13.259 |
| SRR8749032 | Uninduced | 8.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.854 |
| SRR8400027 | Control - Root | 33.888 |