Gene detail information of Glyur000643s00026933 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19390.2 | 1.00E-34 | Rho GTPase activation protein (RhoGAP) with PH domain |
| NR | KHN12032.1 | 5.25E-69 | Rho GTPase-activating protein 20 [Glycine soja] |
| Swissprot | tr|Q8RWQ4|RGAP7_ARATH | 3.00E-39 | Rho GTPase-activating protein 7 |
| trEMBL | tr|V7B7D1|V7B7D1_PHAVU | 6.00E-68 | Uncharacterized protein {ECO:0000313|EMBL:ESW13495.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00643 | 28571 | 29789 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.609 |
| SRR1783600 | control | 0.858 |
| SRR1783602 | moderate drought stress | 0.991 |
| SRR1811619 | moderate drought stress | 1.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.920 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.720 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.991 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.791 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.369 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.460 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.989 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.047 |
| SRR2868004 | Drought Stress (root) | 1.120 |
| SRR2967015 | Control (root) | 2.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.419 |
| SRR9715740 | Leaf | 0.637 |
| SRR9715741 | Leaf | 21.308 |
| SRR9715739 | Root | 0.266 |
| SRR9715742 | Root | 6.607 |
| SRR9715743 | Root | 4.855 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.138 |
| SRR8749028 | MeJA induced 9h | 0.267 |
| SRR8749029 | MeJA induced 9h | 0.080 |
| SRR8749030 | Uninduced | 0.125 |
| SRR8749031 | Uninduced | 0.025 |
| SRR8749032 | Uninduced | 0.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.103 |
| SRR8400027 | Control - Root | 3.804 |