Gene detail information of Glyur000643s00026931 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26360.1 | 1.00E-51 | methyl esterase 13 |
| NR | XP_003552586.1 | 8.02E-76 | PREDICTED: putative methylesterase 11, chloroplastic-like [Glycine max] |
| COG | YP_001531045.1 | 1.00E-10 | alpha/beta hydrolase fold protein [Desulfococcus oleovorans Hxd3] |
| Swissprot | tr|F4IE65|MES13_ARATH | 2.00E-59 | Putative methylesterase 13, chloroplastic (Precursor) |
| trEMBL | tr|I1N4M1|I1N4M1_SOYBN | 3.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G50420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00643 | 22878 | 26530 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.086 |
| SRR1783600 | control | 4.088 |
| SRR1783602 | moderate drought stress | 5.259 |
| SRR1811619 | moderate drought stress | 4.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.844 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.123 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.982 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.764 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.509 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.250 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.671 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.431 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.907 |
| SRR2868004 | Drought Stress (root) | 8.582 |
| SRR2967015 | Control (root) | 6.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.474 |
| SRR9715740 | Leaf | 6.320 |
| SRR9715741 | Leaf | 23.667 |
| SRR9715739 | Root | 2.337 |
| SRR9715742 | Root | 13.627 |
| SRR9715743 | Root | 13.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.200 |
| SRR8749028 | MeJA induced 9h | 5.275 |
| SRR8749029 | MeJA induced 9h | 8.286 |
| SRR8749030 | Uninduced | 12.390 |
| SRR8749031 | Uninduced | 9.370 |
| SRR8749032 | Uninduced | 8.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.380 |
| SRR8400027 | Control - Root | 9.465 |