Gene detail information of Glyur000643s00026925 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003531867.1 | 6.03E-16 | PREDICTED: uncharacterized protein LOC100780709 [Glycine max] |
| trEMBL | tr|I1KWH2|I1KWH2_SOYBN | 2.00E-16 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G27440.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00643 | 10253 | 10627 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.473 |
| SRR1783600 | control | 22.898 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.291 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.159 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.243 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.457 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.002 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.649 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 247.940 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 239.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.150 |
| SRR2868004 | Drought Stress (root) | 18.978 |
| SRR2967015 | Control (root) | 57.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 192.321 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 104.926 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 116.428 |
| SRR9715743 | Root | 94.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.608 |
| SRR8749028 | MeJA induced 9h | 0.252 |
| SRR8749029 | MeJA induced 9h | 0.279 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.909 |
| SRR8400027 | Control - Root | 28.294 |