Gene detail information of Glyur000640s00024118 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G48780.1 | 2.00E-17 | |
| NR | KHN20743.1 | 1.36E-68 | hypothetical protein glysoja_019060 [Glycine soja] |
| trEMBL | tr|I1KIY7|I1KIY7_SOYBN | 5.00E-68 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G10370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00640 | 53592 | 55339 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.244 |
| SRR1783600 | control | 9.731 |
| SRR1783602 | moderate drought stress | 5.203 |
| SRR1811619 | moderate drought stress | 4.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.451 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.320 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.190 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.380 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.522 |
| SRR2868004 | Drought Stress (root) | 7.419 |
| SRR2967015 | Control (root) | 8.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.115 |
| SRR9715740 | Leaf | 0.318 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 2.706 |
| SRR9715742 | Root | 3.578 |
| SRR9715743 | Root | 3.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.459 |
| SRR8749028 | MeJA induced 9h | 6.841 |
| SRR8749029 | MeJA induced 9h | 5.658 |
| SRR8749030 | Uninduced | 0.116 |
| SRR8749031 | Uninduced | 1.525 |
| SRR8749032 | Uninduced | 0.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.417 |
| SRR8400027 | Control - Root | 12.674 |