Gene detail information of Glyur000640s00024108.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G73830.1 | 3.00E-46 | BR enhanced expression 3 |
| NR | XP_007154151.1 | 1.77E-150 | hypothetical protein PHAVU_003G094700g [Phaseolus vulgaris] |
| Swissprot | tr|Q8GWK7|BEE3_ARATH | 1.00E-60 | Transcription factor BEE 3 |
| trEMBL | tr|V7CA67|V7CA67_PHAVU | 7.00E-151 | Uncharacterized protein {ECO:0000313|EMBL:ESW26145.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00640 | 16478 | 18447 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000640s00024108.1 | PF00010.21 | HLH | 161 | 208 | 1.20E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.577 |
| SRR1811619 | moderate drought stress | 0.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.485 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.592 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.277 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.219 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.541 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.422 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.339 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.133 |
| SRR2868004 | Drought Stress (root) | 2.125 |
| SRR2967015 | Control (root) | 1.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.872 |
| SRR9715740 | Leaf | 0.535 |
| SRR9715741 | Leaf | 0.881 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.923 |
| SRR9715743 | Root | 0.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.736 |
| SRR8400027 | Control - Root | 2.989 |