Gene detail information of Glyur000639s00029932 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60680.1 | 7.00E-116 | Plant protein of unknown function (DUF641) |
| NR | XP_004514207.1 | 0 | PREDICTED: uncharacterized protein LOC101508636 [Cicer arietinum] |
| trEMBL | tr|A0A072TSD7|A0A072TSD7_MEDTR | 0 | DUF641 family protein {ECO:0000313|EMBL:KEH16455.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00639 | 61702 | 64136 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000639s00029932.1 | PF04859.7 | DUF641 | 130 | 255 | 1.90E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.957 |
| SRR1783600 | control | 10.135 |
| SRR1783602 | moderate drought stress | 8.576 |
| SRR1811619 | moderate drought stress | 8.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.915 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.408 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.567 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.250 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.821 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.052 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.327 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.157 |
| SRR2868004 | Drought Stress (root) | 19.838 |
| SRR2967015 | Control (root) | 19.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.980 |
| SRR9715740 | Leaf | 4.516 |
| SRR9715741 | Leaf | 6.753 |
| SRR9715739 | Root | 3.837 |
| SRR9715742 | Root | 5.894 |
| SRR9715743 | Root | 6.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.239 |
| SRR8749028 | MeJA induced 9h | 6.211 |
| SRR8749029 | MeJA induced 9h | 3.500 |
| SRR8749030 | Uninduced | 1.322 |
| SRR8749031 | Uninduced | 4.246 |
| SRR8749032 | Uninduced | 2.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.689 |
| SRR8400027 | Control - Root | 10.722 |